Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05149 ATGGATCCTTTTGATGATATTTTACCTGGGGCTCCTGCTGCACGTGCTCGGCCAGGTGGCAAGTTCATGCCAAAGGCCAAATCGAAACAGCTGCCCCGAAAGGAAATATCAGAACACGCAACCTCATCGAGAGATGGAAAGAACACACATGTTGCTTCATCATCCACTGGGACAGACTCCAAAGGAATTTCTCAGAATGAATGTAATGCAGTTACTTCAACGTTAAGTACATCAACAGAAGAATCGATGAGGTCCCATCATCGTCCAGAGGTACTTCCAAATTTGGAGGATGTCACAAATTCTGAAATAGGAAATCCTCAACAAGTTAGTGTAAACAGAGATACTGCAGCCCTAGTGGATTATCTGCCTTCCATGACTGGAGTATCTGAAGTTGATTCTAATCAGAATTTTACAAACTTTACTGAATCAGCTTCTGAGGCAGATCCTGTAGGTTTTGAGGTGGGATCAGTCACTAACTTCATTCGTGAGACCGATCTTAACAGTGGTACAAGACAACCAGTTCACTCTGCCAAAGCTGTAGAAAATGTATTGAATAATATGACTGCTCTGTCTACAACATGCTCAACCATAGGTAGGATGGAAGAGCCACCTAACAGTGGGGAAGGTTCAGTTCTTGATAGCAACAGGAGCTTGGAACTTATTGATAATTCAGTGCAAGCTAACCCAGATAAGGTTGCAATATTTGAGAGCAATGTTCATTCAGATTTTAACTTTAGAAGAGAACAAGAGGTAGTGTCTGCAAAATTTGAATTGGATCCTTTCAGCAATGTCCTCCCTGATCCTGGCACTAGGAATGCTCATAAGTTTCAACCCAAGATTAAGCCCCGACCAAGAGTAGGCAATGCACCAGCTATTGCTTCTGCTTCAACTAGTGTTATGGAAAAATCTATTGGGTTGCCTACTACTTGCACAAATGAGGTTCAATCTTTTCAGTCTAGTGGTGATGGTAGTGGCGGACTAAACCAACCAACCAGTTTACCTTTAACCACATCAGAGATTGTTAAGACAACTGATTTATCCAATAAGTTTGATTATATGAGCTCAAGTACTCCATTCTCTGAAGACAACAGAAGCTTGGCAGCAGTAATTCCTTCCCAATCAGATTCCCTGAATGCTATGCTTTCAGAAGTTGTAGTTCATAATGGAACTAGAGATTGGCCCTCTAGCTTTGGTAAATCAGCTGGAGAGACTGCAGACATTTTCTCAGGGCTGGAATCCCTTGATGACTTCCTCACCCAAGCTGCCCCGGATACAGGAAAACCATCTCTTCATTCTTTCAATGAGAAGGGTACGGAGGAAAATTTTGTCATTCCAGCTTGTACTTCTATTAACTCTTTTGGGATACGTGATACTGCCCAAGTTCAAAGGTGTCCTGGACCCGAGTATCATACCACCCCAGATTCGTTACCCTTCAATGAAGCTGCAGTCCTCAATAAGGATGATACTCACACAAACAATAGAAGGTCGGAAACAGAGGATGTTGTGGACTTGAATCCTGTCTGCCCAGTTGACGATGTATTTGATTATCAATCCATGAAATCTGGCACAGATCCAACTTCTGAAATTCCAGTGCATGAAGAATTGACAAAGTCTGCAGATAGTCCCACTTTGGCTGATCTTTTGCATCAGCATGTTACTGAAGAAAAAGAAGATGCTAACAGGAGAAAAAAGAATGGCACAATGTCAAGTTCTCTAAGGAAGCACGGGGGATCTTCAATAACTGGCGAGGAGGGTAAAGGTGGTAAAACTTCAAGGCAGCTGAGAAAACAAGCAGCTCATAAACCTGCTAAATACTCATTGAATGAGGATGTTGAGGATGATGATGACCTTGACCCTCCTTATAATTGTGATATAGATGAACTTCAAGAAAATGGTGATGACTATGAAGTGGATTATTCATCCAAGAAGAAAAGAGCGTCAACAAGTTCAAAGAAGAAGTCTGCAGCTAAAAATGGAAAGACATCTCAAAAGCGTAAGAAGGCTGATGATGATTTAGAAAAAACTACTAAAGAACCTCCCAAAAAGTTCTCTCATTCAACCCGACGAAAAAAAAGATGTGTTGACAAGGCTCTGCTGGAAATTCCTGAGGATGAACTTGATCCTCGAACCTTGCCCATTAAGGATATCATTTTACTTGCAGAATATAGAGAGCGGCTGGCGAAAAAGGAGGCAACAACTTCAAAAACATCTTCCACCAATCAAAGTGGTGGAGGTTTTCTACATGAGGCTGATGCTAATGATGAAGAGGAGATATTTGGATCAGAAGATGGTAGAGACCCAGGTGATGGTGAAGCCAGTGAAGAGATTCCATTAGCTCCCTCTTTATTTAATTACCAGTCTTTCATGGACAAGGCACCTAGGGGGAAATGGTCAAAACAAGATACTGAACTGTTTTATGAGGCTGTTAGAGAGTTTGGAACAGATTTTTCTATGATACAACAACTTTTTCCTGGTCGAACACGTCATCAAATTAAGTTGAAGTACAAGAAGGAAGAGCGGCAGCATCCTTTACAGTTATCTGACGCTCTAAATAATCGTCCAAAAGATCACCCGCATTTTAAATTGGTGATTGAGCAACTACAACAAGCTTCTACCAAGGCAGAACAAGACCCTGGCAAAGATGCCTCGGATTTCATGACCGGGGAGGAGGTTGAGGAACCGATACCTGAAACTAATGAGGAGGTTGCACCAACTAAGCAGGACACCGATGTTAAAGATCAGGAAGGTCCTGTGGAATTACATAGTCCAGAGCAATCTGAAGATAGTGATGATGACTTTCAAAGATGGTCTCAATATAAAAGTGATTATTAG 2832 0.4174 MDPFDDILPGAPAARARPGGKFMPKAKSKQLPRKEISEHATSSRDGKNTHVASSSTGTDSKGISQNECNAVTSTLSTSTEESMRSHHRPEVLPNLEDVTNSEIGNPQQVSVNRDTAALVDYLPSMTGVSEVDSNQNFTNFTESASEADPVGFEVGSVTNFIRETDLNSGTRQPVHSAKAVENVLNNMTALSTTCSTIGRMEEPPNSGEGSVLDSNRSLELIDNSVQANPDKVAIFESNVHSDFNFRREQEVVSAKFELDPFSNVLPDPGTRNAHKFQPKIKPRPRVGNAPAIASASTSVMEKSIGLPTTCTNEVQSFQSSGDGSGGLNQPTSLPLTTSEIVKTTDLSNKFDYMSSSTPFSEDNRSLAAVIPSQSDSLNAMLSEVVVHNGTRDWPSSFGKSAGETADIFSGLESLDDFLTQAAPDTGKPSLHSFNEKGTEENFVIPACTSINSFGIRDTAQVQRCPGPEYHTTPDSLPFNEAAVLNKDDTHTNNRRSETEDVVDLNPVCPVDDVFDYQSMKSGTDPTSEIPVHEELTKSADSPTLADLLHQHVTEEKEDANRRKKNGTMSSSLRKHGGSSITGEEGKGGKTSRQLRKQAAHKPAKYSLNEDVEDDDDLDPPYNCDIDELQENGDDYEVDYSSKKKRASTSSKKKSAAKNGKTSQKRKKADDDLEKTTKEPPKKFSHSTRRKKRCVDKALLEIPEDELDPRTLPIKDIILLAEYRERLAKKEATTSKTSSTNQSGGGFLHEADANDEEEIFGSEDGRDPGDGEASEEIPLAPSLFNYQSFMDKAPRGKWSKQDTELFYEAVREFGTDFSMIQQLFPGRTRHQIKLKYKKEERQHPLQLSDALNNRPKDHPHFKLVIEQLQQASTKAEQDPGKDASDFMTGEEVEEPIPETNEEVAPTKQDTDVKDQEGPVELHSPEQSEDSDDDFQRWSQYKSDY. 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05149 943 ProSiteProfiles SANT domain profile. 796 840 IPR017884 -
Seca7g05149 943 Pfam Myb DNA-binding like 787 870 IPR039467 -
Seca7g05149 943 MobiDBLite consensus disorder prediction 516 542 - -
Seca7g05149 943 Coils Coil 625 645 - -
Seca7g05149 943 SUPERFAMILY Homeodomain-like 795 843 IPR009057 -
Seca7g05149 943 Gene3D - 797 859 - -
Seca7g05149 943 ProSiteProfiles Myb-like domain profile. 789 839 IPR001005 -
Seca7g05149 943 MobiDBLite consensus disorder prediction 28 45 - -
Seca7g05149 943 FunFam Predicted protein 797 876 - -
Seca7g05149 943 MobiDBLite consensus disorder prediction 732 746 - -
Seca7g05149 943 MobiDBLite consensus disorder prediction 1 67 - -
Seca7g05149 943 MobiDBLite consensus disorder prediction 646 661 - -
Seca7g05149 943 MobiDBLite consensus disorder prediction 662 682 - -
Seca7g05149 943 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 789 845 IPR017930 -
Seca7g05149 943 MobiDBLite consensus disorder prediction 836 943 - -
Seca7g05149 943 MobiDBLite consensus disorder prediction 46 67 - -
Seca7g05149 943 MobiDBLite consensus disorder prediction 554 690 - -
Seca7g05149 943 SMART sant 793 841 IPR001005 -
Seca7g05149 943 MobiDBLite consensus disorder prediction 609 634 - -
Seca7g05149 943 CDD SANT 796 837 IPR001005 -
Seca7g05149 943 MobiDBLite consensus disorder prediction 903 943 - -
Seca7g05149 943 MobiDBLite consensus disorder prediction 268 287 - -
Seca7g05149 943 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 943 - -
Seca7g05149 943 MobiDBLite consensus disorder prediction 316 336 - -
Seca7g05149 943 MobiDBLite consensus disorder prediction 728 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05149 Seca-Chr7 148944039 148952058 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca7g05149 Myb_DNA-bind_7 3e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05149 K15198 - gmx:100792788 1080.86