Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05137 ATGGGTGATTATGTGGACCGGGGTTATTATTCAGTTGAAACTGTAACGCTCCTTGTGGCACTGAAAGTGCGGTATCCTCAGCGAATTACAGTTCTTAGAGGAAACCATGAAAGCCAACAGATCACTCAAGTATATGGATTTTACGATGAATGCCTAAGAAAGTATGGTAATGCTAATGTTTGGAAGATCTTTACAGACCTTTTTGATTTCTTTCCATTGACTGCATTGGTTGAATCAGAAATCTTTTGCTTACATGGTGGACTTTCACCTTCAATTGAGACCCTTGATAACATAAGGAGCTTTGATCGTGTTCAAGAGGTTCCTCATGAAGGGCCCATGTGTGATCTGTTGTGGTCTGACCCAGATGATAGATGTGGCTGGGGAATTTCTCCTCGTGGTGCTGGGTATACTTTTGGCCAGGATATATCTGAACAATTTAATCACACAAACAGTCTTAAGTTGATCGCTAGAGCTCATCAGCTAGTTATGGATGGATTCAACTGGGCTCATGAACAAAAGGTGGTTACCATTTTTAGTGCACCTAACTACTGCTATCGATGTGGGAACATGGCTTCCATTTTGGAGGTTGATGATTCCAAAGGCCACACATTTATCCAGTTTGAACCTGCTCCCCGGAGAGGAGAACCTGATGTCACCCGTAGAACGCCTGATTATTTCCTATGA 684 0.4254 MGDYVDRGYYSVETVTLLVALKVRYPQRITVLRGNHESQQITQVYGFYDECLRKYGNANVWKIFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRSFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDSKGHTFIQFEPAPRRGEPDVTRRTPDYFL. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05137 227 MobiDBLite consensus disorder prediction 208 227 - -
Seca7g05137 227 ProSitePatterns Serine/threonine specific protein phosphatases signature. 32 37 IPR006186 GO:0016787
Seca7g05137 227 Gene3D - 1 227 IPR029052 -
Seca7g05137 227 SUPERFAMILY Metallo-dependent phosphatases 1 212 IPR029052 -
Seca7g05137 227 PRINTS Serine/threonine phosphatase family signature 31 55 IPR006186 GO:0016787
Seca7g05137 227 PRINTS Serine/threonine phosphatase family signature 151 171 IPR006186 GO:0016787
Seca7g05137 227 PRINTS Serine/threonine phosphatase family signature 173 189 IPR006186 GO:0016787
Seca7g05137 227 PRINTS Serine/threonine phosphatase family signature 66 92 IPR006186 GO:0016787
Seca7g05137 227 PRINTS Serine/threonine phosphatase family signature 95 122 IPR006186 GO:0016787
Seca7g05137 227 SMART pp2a_7 1 211 IPR006186 GO:0016787
Seca7g05137 227 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 227 IPR047129 GO:0004722
Seca7g05137 227 Pfam Calcineurin-like phosphoesterase 2 160 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05137 Seca-Chr7 148781320 148788783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05137 2 157 Calmodulin-binding Proteins AT5G63870 33.854 5.49e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05137 K04382 - thj:104802782 474.167