Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05128 ATGAACGTGGAATCTTTCTCTCAGCTCCCTTTCATCCGCCCAGCACCCTCCACCACCAAAGAGAAAGGCATCCGTCTCTTCGGCATCGAATTCGGCTCCACGGAGGACTCAGAGTCAGGAGAAACAACCACAAATGCATTCGAAGTGGAAAGCAACAACAAGCTGGACAACAACAACAACAACAGTAGCACAGCAGAGAACGGAGAGAGCAGCAGCAGCAGGAGATTCGAATGCCACTACTGTTGCAGAAACTTCCCAACCTCACAAGCCTTAGGAGGTCACCAAAACGCACACAAAAGAGAACGCCAACACGCCAAAAGAGCACACCTTCAGTCCGCCATGGTTCACGGTAGCACCACCTTCTCCGACCACCACCACCTTTATCCCCTAATGAACTACAGGTTCACCTCTACCCCAACCACACCAATGCCTTCTTATCCAACATGGAACTCCTCCTCCAATGCCACTACCACTAGCACCGCTCTTGGTGGAAGGTTTTATAATTATGGAACCTCTTCTTATTCTTCTCACTCTCACTCTCACTCTCACCACCAACAGCAACAACCTATTAATGGTAGCCCCTTGGCCTTTTGGAGAATCCCAAACGGCACCGTTCATAGTAGTAACCCTACTTCTTCTTCTTCTTTCAACCATCATCCCAGCTTGCCCTTGCTTGCTGGTGAGGAAGTGAGAGCCTCTCATCAAGTTGGAATTGGCACTACTGCAGGTTCACAAAACCGGTACGTTTATGACTCCAAACGTAGCACTACTACTACTACTGTCCATGACCATGTGGGGATGATAGAAAGGGGTATGAGACAGTTGGGAGCGCATGAACATTTTGTCGAAACACACGTGTGGCTAAATCCATCATATTGTCCAGGCAGGTGGGGTGATGAGAGAGGTGGGTTTTCTGATTCAATGCAATGTAATTGTGATAGGTCATGA 948 0.4852 MNVESFSQLPFIRPAPSTTKEKGIRLFGIEFGSTEDSESGETTTNAFEVESNNKLDNNNNNSSTAENGESSSSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHGSTTFSDHHHLYPLMNYRFTSTPTTPMPSYPTWNSSSNATTTSTALGGRFYNYGTSSYSSHSHSHSHHQQQQPINGSPLAFWRIPNGTVHSSNPTSSSSFNHHPSLPLLAGEEVRASHQVGIGTTAGSQNRYVYDSKRSTTTTTVHDHVGMIERGMRQLGAHEHFVETHVWLNPSYCPGRWGDERGGFSDSMQCNCDRS. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05128 315 MobiDBLite consensus disorder prediction 175 193 - -
Seca7g05128 315 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Seca7g05128 315 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Seca7g05128 315 MobiDBLite consensus disorder prediction 175 221 - -
Seca7g05128 315 PANTHER ZINC FINGER PROTEIN GIS 1 259 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Seca7g05128 315 SUPERFAMILY beta-beta-alpha zinc fingers 73 104 IPR036236 -
Seca7g05128 315 MobiDBLite consensus disorder prediction 202 220 - -
Seca7g05128 315 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05128 Seca-Chr7 148647984 148649483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05128 1 213 C2H2 Transcription Factor Family AT2G41940 38.793 5.65e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05128 - - gsj:114391971 324.324