Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05127 ATGGTATCAGAGCTCCATCCATGGAGCTCACCACCTTCCTCTTGCCACAAAACTCTGTTTCCAGTCATCTTTGATCCACCTAGTTTTCTCCTCACACACTCTATCATCGTTCATCTATGGAGGTTAACAAAACTGGAGAAGAAATCAATTCCGTTTCTTCCTCCTAGAGCTCTATCCAACAAACTGCGGTGGAAAGTTGTTCCAGATCCTTTCACCTTTGGTCATATCTCCCCTGTTTCTACACAATTGAAGAAGCAGAACGTGCAGGACTCGCCCATGGCAGTTGCGATAACAGCCTTCAAGGACAACAAGATTGATAAGAACATGCAAGACTTGTTCCAGGACCTGATTGCCCACAGCTACCTCTCGCCGGAGTCGAAGACTCTCTGCGTGGACACGCCGACCGGCAGCGATGTCTCCACTCTGCGGAAGATTGGAGTCCCCGACGCCGTCGAGATCTCAAAGAAGGCGTCAAAGCCGCTGGTGATATTCAGTGATTCTCGCTGGATTCTGTTCGTGAACGACAGCTTCGACTTCGTCTTCTCCGGTGATGGTGCGCTCGAGAAATCGCTGAATCCGTCAGAATTTGCCGCCGAGATCGCATGGACTCTCAAACCCGAAGGGTTTGCCGCGTTCCATGTAAAGGCCAAACATACTTACAGTTCCAATCCATGTAAAGGAAATGCCTCCGGCTCTTCAAAAGAAGATCATCCCGCGCCGCCAGCAGCACCAAACATTTTGATGACCTCCAGAGATCACGATTCTCCCTTCAACAGTGGCGGCATCAGCTTTCTATCTGGAAGTCGAAATGGAAGGTCCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCTTCAATGGAGGATTTCTTTGAGACCAAAATATCAGAGGTTGATGGTCAGATGGTTGCCTTTTTCGGCGTTTTTGATGGACATGGAGGTTCGCGCACTGCAGAGTACCTACAAAATAATTTGTTTAAAAATTTGAGTAGCTATCCTGACTTTATCAAAGACACTAAGAGCATCCACAATGGGAGCTGGGGAAGCAACTGA 1053 0.4796 MVSELHPWSSPPSSCHKTLFPVIFDPPSFLLTHSIIVHLWRLTKLEKKSIPFLPPRALSNKLRWKVVPDPFTFGHISPVSTQLKKQNVQDSPMAVAITAFKDNKIDKNMQDLFQDLIAHSYLSPESKTLCVDTPTGSDVSTLRKIGVPDAVEISKKASKPLVIFSDSRWILFVNDSFDFVFSGDGALEKSLNPSEFAAEIAWTLKPEGFAAFHVKAKHTYSSNPCKGNASGSSKEDHPAPPAAPNILMTSRDHDSPFNSGGISFLSGSRNGRSSYGYSSFKGKRSSMEDFFETKISEVDGQMVAFFGVFDGHGGSRTAEYLQNNLFKNLSSYPDFIKDTKSIHNGSWGSN. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05127 350 PANTHER METHYLTRANSFERASE 101 223 - -
Seca7g05127 350 SUPERFAMILY PP2C-like 268 332 IPR036457 -
Seca7g05127 350 ProSitePatterns PPM-type phosphatase domain signature. 305 313 IPR000222 GO:0043169
Seca7g05127 350 Gene3D - 265 346 IPR036457 -
Seca7g05127 350 MobiDBLite consensus disorder prediction 220 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05127 Seca-Chr7 148415312 148416364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05127 221 340 PP2C-type Phosphatase Gene Family AT1G43900 60.000 4.20e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05127 K17506 - gmx:100776867 194.512