LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca7g05114	ATGAGGATCAGAAAGAGGCAAGTGCCTTTCCCTCTCTCAGATCCCAACCTGATCAACCGGTCACCGGTGTTGGTGCAACTCAACGATGCTTCAACCACCTCACCAAAACCTTCTTGCACTCATGCCTCGGCTACTGCACCGCTATCCTTCTTGGATCCTCCTCAGCCGTCTGATCAGCCACTCCCACCGATCGGGAAACCAACCAACGGCCCTGATGATTCCTTCGCACACAGGAGGCAGGACAAGAAGCAAGGATGTTTGGTGGAAGGAGAGGGACAGAAGGGTAATGATACCAGGAAAGGAAGCATCTTGAGTTCAGAAATGCCAAGTGAAGTCATCTCACCCTCCTCAAGCACTCTTAATTCTAAACAAGATGGGAGATGGTGTGAGGGAGAGAAAGCATTTCCATTCAAGAAAAGAAGAGGAAACTTCGAGAATGTTGCAATAGAGGATAGCATTAGCATTAACCATAACAATGATAATGGTAACAAGAAGAAGATGAAGAAGACAAAGAGAAGATTGAAGACAAAGATGAACAAGAAATGTTTGGGCCAAGGTGATAGTAATAATGAATTAGATGAAGAAGGGGTGGTGGTGATGAGAGAAACGAAACCTGATCATGTGAATGGTGGTAAGAAGAGGGTAAGAGGTGGTGCACTCATGGAAGGTTCAAGGTGCAGTCGTGTGAATGGGAGAGGATGGAGATGTTGTCAACAAACACTGGTTGGTTATTCACTTTGTGAGCATCACTTAGGAAAAGGAAGGTTGAGAAGCATGACAAGTGTAAGAAGCAGGTCTATTGCTGCACCAAAGAATAATAACAACATGCAAGAACAAACACTATCTGAATTACCTTCATCTTCTACTAGTTCTCTACCTGAAAAGCAAACCAAGTGTGTCACTCATCTGAATGATGGTGAAGACAATGATGAGAAGAAGCCAGTGATGGTTACAAAGAAGAGGATGAAGCTTGGAATGGTGAAAGCAAGATCAATAAGCAGCTTGCTGGGACAAACCAACAACACTACTGAAATTGCTCTCGTAGCTGAGAATAATAACAAGTAA	1065	0.4394	MRIRKRQVPFPLSDPNLINRSPVLVQLNDASTTSPKPSCTHASATAPLSFLDPPQPSDQPLPPIGKPTNGPDDSFAHRRQDKKQGCLVEGEGQKGNDTRKGSILSSEMPSEVISPSSSTLNSKQDGRWCEGEKAFPFKKRRGNFENVAIEDSISINHNNDNGNKKKMKKTKRRLKTKMNKKCLGQGDSNNELDEEGVVVMRETKPDHVNGGKKRVRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIAAPKNNNNMQEQTLSELPSSSTSSLPEKQTKCVTHLNDGEDNDEKKPVMVTKKRMKLGMVKARSISSLLGQTNNTTEIALVAENNNK.	355

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca7g05114	354	MobiDBLite	consensus disorder prediction	72	96	-	-
	Seca7g05114	354	ProSiteProfiles	WRC domain profile.	220	264	IPR014977	-
	Seca7g05114	354	Pfam	WRC	222	262	IPR014977	-
	Seca7g05114	354	MobiDBLite	consensus disorder prediction	29	45	-	-
	Seca7g05114	354	MobiDBLite	consensus disorder prediction	29	125	-	-
	Seca7g05114	354	PANTHER	EXPRESSED PROTEIN-RELATED	87	336	-	-
	Seca7g05114	354	MobiDBLite	consensus disorder prediction	53	67	-	-
	Seca7g05114	354	MobiDBLite	consensus disorder prediction	98	125	-	-
	Seca7g05114	354	MobiDBLite	consensus disorder prediction	155	175	-	-
	Seca7g05114	354	MobiDBLite	consensus disorder prediction	268	296	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca7g05114	Seca-Chr7	148148131	148150527	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca7g05114	221	291	GRF Transcription Factor Family	AT5G53660	32.394	6.31e-06	45.8

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca7g05114	-		-	gmx:102665471	368.237

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