Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05114 ATGAGGATCAGAAAGAGGCAAGTGCCTTTCCCTCTCTCAGATCCCAACCTGATCAACCGGTCACCGGTGTTGGTGCAACTCAACGATGCTTCAACCACCTCACCAAAACCTTCTTGCACTCATGCCTCGGCTACTGCACCGCTATCCTTCTTGGATCCTCCTCAGCCGTCTGATCAGCCACTCCCACCGATCGGGAAACCAACCAACGGCCCTGATGATTCCTTCGCACACAGGAGGCAGGACAAGAAGCAAGGATGTTTGGTGGAAGGAGAGGGACAGAAGGGTAATGATACCAGGAAAGGAAGCATCTTGAGTTCAGAAATGCCAAGTGAAGTCATCTCACCCTCCTCAAGCACTCTTAATTCTAAACAAGATGGGAGATGGTGTGAGGGAGAGAAAGCATTTCCATTCAAGAAAAGAAGAGGAAACTTCGAGAATGTTGCAATAGAGGATAGCATTAGCATTAACCATAACAATGATAATGGTAACAAGAAGAAGATGAAGAAGACAAAGAGAAGATTGAAGACAAAGATGAACAAGAAATGTTTGGGCCAAGGTGATAGTAATAATGAATTAGATGAAGAAGGGGTGGTGGTGATGAGAGAAACGAAACCTGATCATGTGAATGGTGGTAAGAAGAGGGTAAGAGGTGGTGCACTCATGGAAGGTTCAAGGTGCAGTCGTGTGAATGGGAGAGGATGGAGATGTTGTCAACAAACACTGGTTGGTTATTCACTTTGTGAGCATCACTTAGGAAAAGGAAGGTTGAGAAGCATGACAAGTGTAAGAAGCAGGTCTATTGCTGCACCAAAGAATAATAACAACATGCAAGAACAAACACTATCTGAATTACCTTCATCTTCTACTAGTTCTCTACCTGAAAAGCAAACCAAGTGTGTCACTCATCTGAATGATGGTGAAGACAATGATGAGAAGAAGCCAGTGATGGTTACAAAGAAGAGGATGAAGCTTGGAATGGTGAAAGCAAGATCAATAAGCAGCTTGCTGGGACAAACCAACAACACTACTGAAATTGCTCTCGTAGCTGAGAATAATAACAAGTAA 1065 0.4394 MRIRKRQVPFPLSDPNLINRSPVLVQLNDASTTSPKPSCTHASATAPLSFLDPPQPSDQPLPPIGKPTNGPDDSFAHRRQDKKQGCLVEGEGQKGNDTRKGSILSSEMPSEVISPSSSTLNSKQDGRWCEGEKAFPFKKRRGNFENVAIEDSISINHNNDNGNKKKMKKTKRRLKTKMNKKCLGQGDSNNELDEEGVVVMRETKPDHVNGGKKRVRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIAAPKNNNNMQEQTLSELPSSSTSSLPEKQTKCVTHLNDGEDNDEKKPVMVTKKRMKLGMVKARSISSLLGQTNNTTEIALVAENNNK. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05114 354 MobiDBLite consensus disorder prediction 72 96 - -
Seca7g05114 354 ProSiteProfiles WRC domain profile. 220 264 IPR014977 -
Seca7g05114 354 Pfam WRC 222 262 IPR014977 -
Seca7g05114 354 MobiDBLite consensus disorder prediction 29 45 - -
Seca7g05114 354 MobiDBLite consensus disorder prediction 29 125 - -
Seca7g05114 354 PANTHER EXPRESSED PROTEIN-RELATED 87 336 - -
Seca7g05114 354 MobiDBLite consensus disorder prediction 53 67 - -
Seca7g05114 354 MobiDBLite consensus disorder prediction 98 125 - -
Seca7g05114 354 MobiDBLite consensus disorder prediction 155 175 - -
Seca7g05114 354 MobiDBLite consensus disorder prediction 268 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05114 Seca-Chr7 148148131 148150527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05114 221 291 GRF Transcription Factor Family AT5G53660 32.394 6.31e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05114 - - gmx:102665471 368.237