Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05111 ATGCCAAATGGAAGCTTAGACAGATTCATTTTCTCTGGGGATTCTACTCTGGGTTGGGAAAGGAGGCTTAGTGTTATATGTGGGGTATCTAGAGCACTGGATTATCTTCACAATGGTTGTGATAAAAGAGTGCTACATAGAGACATAAAACCCAGCAATGTAATGTTGGATTCAGATTTCAATGCTAGACTTGGTGATTTTGGCTTAGCTAGAACCATTCATCTTAGTGAAAAAACTCACCACTCAACAAGAGAAATTGCTGGAACACCAGGATATATAGCACCAGAAAGCTTCCACACTAGAAGGGCTTCTGTCGAAACTGATGTTTATGCATTTGGTGTTCTGATGCTAGAAGTTGTCTGTGGAAGAAGAAAGCTTGAACACAAACAGTATCTGAATAATTATAACAATAGCATTATGGATTGGGTTTGGGAGCTTCACAGTGAAGAAAACATAACTGATGCTGTAGATTTGAGACTGAATGGTGATTTTAATAAGGTTCAAGCTAGGTGTGTGCTTGAGTTGGGGTTAGCTTGTTGCCATCCCAACCCATATGAGAGGCCATCCATGAGAAGTGTCATGCAGGTGCTACAAGGGGAAACAGCTCCACCATTTGTACATGTTGAGAAACCTGCTTTTACATGGCCAGCAATGGCTCCTGTTCTCAAAGAAGAGTTAAATTCACATACTACTGGATCCCAAAATGAACCAATAACAGAACTGATTAGTGGGAGATGA 738 0.4065 MPNGSLDRFIFSGDSTLGWERRLSVICGVSRALDYLHNGCDKRVLHRDIKPSNVMLDSDFNARLGDFGLARTIHLSEKTHHSTREIAGTPGYIAPESFHTRRASVETDVYAFGVLMLEVVCGRRKLEHKQYLNNYNNSIMDWVWELHSEENITDAVDLRLNGDFNKVQARCVLELGLACCHPNPYERPSMRSVMQVLQGETAPPFVHVEKPAFTWPAMAPVLKEELNSHTTGSQNEPITELISGR. 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05111 245 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05111 245 PANTHER - 1 204 - -
Seca7g05111 245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
Seca7g05111 245 SUPERFAMILY Protein kinase-like (PK-like) 1 197 IPR011009 -
Seca7g05111 245 Gene3D Transferase(Phosphotransferase) domain 1 1 203 - -
Seca7g05111 245 PIRSF ILK 1 201 - -
Seca7g05111 245 FunFam probable L-type lectin-domain containing receptor kinase S.5 1 203 - -
Seca7g05111 245 SMART serkin_6 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05111 245 Pfam Protein kinase domain 3 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05111 Seca-Chr7 148104030 148104788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05111 1 215 Receptor kinase-like Gene Family AT3G53380 46.575 1.16e-60 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca7g05111 Pkinase 1.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05111 - - tcc:108661882 349.747