Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05078 ATGGGAACTTGCAATCAGCCTTTTGTGATGTCTTGTGGTGGAGGAGGAGTGGAACAACCACCATATATAGGCCAAGGCAAATCATCTAGCACTATTATCAGCCGTTTTGAGTCACCAGCTACTGCCTTTTATGCAACAGAAATTTGCATGGGTTTCCCACAATATGATTGCCAACAAGTTGGTAATCCCTCTTTGGCATCTCAATTCTCAAAGATCAATGATTTGGAATTCCCTTTGTATCAATGTCCCAGGGATAACCTTTTCTTGGATTCAGCAAACCAACCTGGCCCCAACTTTGAGTTGTCAAATCCTTTGCAAGCAATACTGAAACCCCAATTGAATAGTGATCAATGTTGTAGATCTCCTGAAAAATCTAATAAAATCCCATGTGGGAATTTTCCTGACAACAATTTTCTTCCATTTGAACAACATAAGTTGTTCAATGATGATGCTGCCTCAATTAGTAGGAGCGCATCCCTTCCTTCTAAAGGAAATCAGGATCACACAGTTTCTTGTGGTTCATATAATTTACCTGTTTCACAGCTCAGCTTCTCTTCTCAACAAGAGAAGCTGTCTCCAGCATTCTCTGCAGGAAAAGTGTCAACTACTTCTGGAAACCCTGCTTCTAATGGTTCCTCAGTCTCAAGTAAAACACGTATAAGATGGACTCAGGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCTGAGAAGGCAACACCAAAAGCTATATTAAGGCTGATGGAATCAGATGGATTGACCATCTTCCATGTTAAAAGTCATTTGCAGAAATACAGAATTGCGAAATACATGCCAGAGTCAACTCAGGGGAAATCTGACAAAAGAACCCATGTAGAGAATGTGCAACTTGATGTCAAAACTGGCTTACAAATTAGAGAGGCACTTCAGCTGCAGCTAGATGTTCAGAGGCGTCTTCATGAACAGCTAGAGATTCAGAGAAAGTTGCAGTTGCGGATTGAGGAACAAGGTAAGCAGCTGAAGATGATGTTTGACCAACAGCAGAAGACAAGTAATGACCTCTTGAATACTCAGAATTTGAGCAATACAGCCAATAGTGATAAACCAAATAGTCCTAAAGATGTTGAGGATTCCATTTCTGAAGGGTCTGGAAAATCCTTATTCCATTCCAAGATAAGTTAG 1173 0.4075 MGTCNQPFVMSCGGGGVEQPPYIGQGKSSSTIISRFESPATAFYATEICMGFPQYDCQQVGNPSLASQFSKINDLEFPLYQCPRDNLFLDSANQPGPNFELSNPLQAILKPQLNSDQCCRSPEKSNKIPCGNFPDNNFLPFEQHKLFNDDAASISRSASLPSKGNQDHTVSCGSYNLPVSQLSFSSQQEKLSPAFSAGKVSTTSGNPASNGSSVSSKTRIRWTQDLHEKFVECVNRLGGAEKATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPESTQGKSDKRTHVENVQLDVKTGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTSNDLLNTQNLSNTANSDKPNSPKDVEDSISEGSGKSLFHSKIS. 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05078 390 Gene3D - 216 275 - -
Seca7g05078 390 MobiDBLite consensus disorder prediction 195 217 - -
Seca7g05078 390 NCBIfam myb-like DNA-binding domain, SHAQKYF class 217 272 IPR006447 GO:0003677
Seca7g05078 390 MobiDBLite consensus disorder prediction 350 390 - -
Seca7g05078 390 SUPERFAMILY Homeodomain-like 215 271 IPR009057 -
Seca7g05078 390 Pfam MYB-CC type transfactor, LHEQLE motif 300 347 IPR025756 -
Seca7g05078 390 Coils Coil 303 323 - -
Seca7g05078 390 MobiDBLite consensus disorder prediction 350 366 - -
Seca7g05078 390 FunFam Myb family transcription factor 216 274 - -
Seca7g05078 390 Pfam Myb-like DNA-binding domain 221 270 IPR001005 -
Seca7g05078 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 216 274 IPR017930 -
Seca7g05078 390 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 199 362 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05078 Seca-Chr7 147320795 147323469 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05078 200 344 G2-like Transcription Factor Family AT4G28610 60.135 3.08e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca7g05078 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05078 - - gmx:100780919 558.14