Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05071 ATGGCTCTCCGATCGTCTTCAAGGAAGGAGTTCAAGCCCACAGATGATCAACTGTTGCGATTGTTCCTCTACAATAAGGTCCATGGTAAACCTGTGCCTAACGATGCAACCATTCTTGAATATGACTTGTTTGGTGAAAGGAACCCTTGGGAGATTTGGCAAGAGTTTGAAGCTCCCTACTCTTACGATGAAAAGGACCTCTACTTTTTCACCATCTTAAAGAGGAAGTTTGAAGGAGGCACTAGCGGACGCGTGGTTCGCACCATTGGGTGTGGCGCATGGGAAGGTGAAGATGTTGGAAAAGCTATAGTGGCCACTGACACAAAACAAAACCTCGGCATGAAGAAACGTTATCGTTTTGAGAAGAGTGGCACTGAACACGATGGTGGATGGATCTTGCATGAATACAGCCTTCACTCTTCTTTGATAAACACTGACCCTTCAGCCGTTAATTATGTTCTATGCAGATTTAGAAAGAACTTGAGACATAATACTACTATAGGTAGGAGAAATACTAGGCCGAATGTGCCCAGGGTCACCAGACAACGTAGGACCATCGTTCTTGCACTCGAGGTTCCACATCAATCTGACATTAATGATGTTGGGTTGGGTGAAGATATTTGCGAAGGACCACTAAACCATGCAGACAGTGGAAAAAACATAACTGAGATGGTTGAAACTAGCACTAGAGCAGAGTCGGAATGTGAGGATGAAGAAGATGGTGATCCTGCTATGTCATTTGGGGAGTTATTTGTGTTGGAGTTAAGAAGTTATGCAGAATGCTTGACCAAAGAGGAAGACATCCCCATGCTTCCCAATACAATTTACAGGGACTTGTTGTCGGAAAATATTGATATTAAGTACCTCAAGTAG 873 0.4364 MALRSSSRKEFKPTDDQLLRLFLYNKVHGKPVPNDATILEYDLFGERNPWEIWQEFEAPYSYDEKDLYFFTILKRKFEGGTSGRVVRTIGCGAWEGEDVGKAIVATDTKQNLGMKKRYRFEKSGTEHDGGWILHEYSLHSSLINTDPSAVNYVLCRFRKNLRHNTTIGRRNTRPNVPRVTRQRRTIVLALEVPHQSDINDVGLGEDICEGPLNHADSGKNITEMVETSTRAESECEDEEDGDPAMSFGELFVLELRSYAECLTKEEDIPMLPNTIYRDLLSENIDIKYLK. 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05071 290 ProSiteProfiles NAC domain profile. 5 160 IPR003441 GO:0003677|GO:0006355
Seca7g05071 290 Gene3D NAC domain 14 164 IPR036093 GO:0003677|GO:0006355
Seca7g05071 290 PANTHER NAC TRANSCRIPTION FACTOR 56 10 183 - -
Seca7g05071 290 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
Seca7g05071 290 SUPERFAMILY NAC domain 11 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05071 Seca-Chr7 147196139 147198274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05071 11 160 NAC Transcription Factor Family AT3G15510 32.335 2.12e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Seca7g05071 NAM 8.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05071 - - mtr:11433340 249.98