Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05070 ATGTTGGCCATGGCTGAATCACAGGCGAACAGCGAGAGCAGGAATGGAGCAGCACAAAGAAACGAAGAACAAGATGATTACATGGGTGACCTTTCTAAGTTTCTTCCTTCCGAGGCTCTTAACCCTCCAAAGTCTTCATCCAAAACGATTACTAACAAGAAAGATACTTCAGTCAACTCTTCCAAGAGTCAGTTAAAAACTCTTAGCTGGCAAGAACGACGAAAACTTGAAAGAGAAAGAAAGCAACAACAAGAGGATGAGGAAACATTAGCTAAAGTGGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTGCTCAAACAGATGGGTTATACTCCAGGTTCTGCCCTTGGCAAGCAGGGCTTGGGCAGGGCTGAACCAGTGGGGATTGAAATTCGACGGTCACGAGCAGGTATAGGCCTAGAAAATCCTCACAAGGAGAAAAGGAAAAAGGAGGAAATCATGATCGACAGGAAAAAGAGGAAAGAGCAGGCCTTAATGGAAGAATTTGGGTCTAGGCAGAAGTCACGGTGGCAGAGTAGGAGAGTTTTAATTAATTTCAACAAGGCAAAGGCTGCCCTTGACCAATTGGAGAATAGGGAAATTGTGGTGCCACAAAAGAATGAGGATGATGCTGAGGATGAAGATGAAGAAGAGGAAGAAATAACAGAAGAGGACTTGCACGATGTTTTGATGAAACTGAGGGACGAGTTTAATTATTGTCTCTTTTGTGGATGCAAATATGAATCAAGGGATGCCCTTTTGGCTAACTGCCCTGGAACCAATGAAGATGACCACTAA 804 0.4366 MLAMAESQANSESRNGAAQRNEEQDDYMGDLSKFLPSEALNPPKSSSKTITNKKDTSVNSSKSQLKTLSWQERRKLERERKQQQEDEETLAKVEAPIPQSNIGFKLLKQMGYTPGSALGKQGLGRAEPVGIEIRRSRAGIGLENPHKEKRKKEEIMIDRKKRKEQALMEEFGSRQKSRWQSRRVLINFNKAKAALDQLENREIVVPQKNEDDAEDEDEEEEEITEEDLHDVLMKLRDEFNYCLFCGCKYESRDALLANCPGTNEDDH. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05070 267 Coils Coil 73 93 - -
Seca7g05070 267 MobiDBLite consensus disorder prediction 203 225 - -
Seca7g05070 267 MobiDBLite consensus disorder prediction 1 17 - -
Seca7g05070 267 MobiDBLite consensus disorder prediction 209 225 - -
Seca7g05070 267 MobiDBLite consensus disorder prediction 68 92 - -
Seca7g05070 267 ProSiteProfiles G-patch domain profile. 99 145 IPR000467 GO:0003676
Seca7g05070 267 SMART DUF4187_2 213 267 IPR025239 -
Seca7g05070 267 Pfam Domain of unknown function (DUF4187) 214 267 IPR025239 -
Seca7g05070 267 Coils Coil 150 170 - -
Seca7g05070 267 Coils Coil 181 201 - -
Seca7g05070 267 PANTHER UNCHARACTERIZED 21 267 IPR039249 -
Seca7g05070 267 MobiDBLite consensus disorder prediction 1 94 - -
Seca7g05070 267 SMART G-patch_5 97 143 IPR000467 GO:0003676
Seca7g05070 267 MobiDBLite consensus disorder prediction 39 67 - -
Seca7g05070 267 Pfam G-patch domain 99 142 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05070 Seca-Chr7 147186940 147189511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05070 91 141 C2H2 Transcription Factor Family AT5G26610 45.098 8.49e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05070 - - gmx:100777380 402.905