Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05064 ATGGCGTTTTCTTTGACTATAGAAGAAGCAGAACAACCAGAGCAAGAGACACAGTTTTCATCACTTCACTCTCATTCTCATATGCTCATGGCTTCCAACAGTGCTAAGAGTACCAACTCAACAACCACTCAACTTGAACCACTCCCACCACCTCACCATAACCATAACCACCACCACCACCACCCACAACAACAACAACCTCATCAAATACAGGACCATCAAATCTCTTTTGGCATGATGCCTTCCTCCTCTATTATCCCTGGAAACTACCTAAGCAAGGATTCTGGTGCTTATGATTTAGGTGAACTGGATCAAGCCTTTTTTCTGTATCTTGATGGACAAGCTGACCCATCTAGTGTTCAAGACCAAAGACCAGAGAACTCATCATCATCAGGAATGAGGCCACCACCAACTCTCAACATTTTCCCATCTCAGCCTATGCATGTAGCACCACCACCATCCAATTCAAAGGCTAGCATGGAGATACCTTCTCCACCAAACAATGGTCCCAAGAGACCATCAGGGCCATCCATGGCTCGGAATGAGACCATCTCAGCACCCGAACCACCAAAAACTGTCAAGCAGCGAGAGAGCAATCGCAGCAAGGCTCCAACTTCAAGCTCTGAACATGAAGGGCCGAAAACCCCAGATCCTAAGACACTGAGAAGGCTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTGAGGAAAAAGGCTTATGTTCAGCAGCTGGAGACTAGTAGGATCAAGCTGAATCAGCTGGAACAAGAACTGCAGCGTCTTAGAACTCAAGGTATATTAATGGGTGGTGGTGCACTCATGGGAGGAGAACAAGGACTTCCTGTTGGCGTTGGCATGGGTAACATCACCCCAGATGCTGCCATGTTTGATGTGGAGTATGCTAGGTGGTTAGAGGAGCACCACAAGCTAGTGGGCGAGCTAAGAGCTGCGCTCCATGAACACCTCCATGAGAATGAACTTAGGCTATATGTCGAGAATTGCTTGGCTCATTATGACCAAGTGATGAATCTTAAGAGTATACTGGCCAAGACTGATATATTCCATCTTATAAATGGGATATGGATGACCTGGACAGAACGGAACTTCATGTGGATCGGTGGCTTCAGGCCATCTGAAATCATTAAGATTATTCTGAGCCAAGTTGAGCCTCTTACGGAGCAACAATTACTTGGAATATGTGGGTTGCAACAATCTACACAAGAGGCAGAAGAGGCTCTTTCCCAAGGGCTTGAAGCCCTCAATCAATCTATCTTTAACACTTTAACATCTGACGATTTGTGCGCTCCACCCAACATGGCTAACTACATGGGAACGATGGCTGTGGCCATGAACAAGCTCTCCAATCTTGAAGGCTTTGCGAGACAGGCTGATCATCTGAGGCACCAAACCCTTCACCGTCTGCATCAGTTGCTAACAACACGCCAAGCTGCAAAGTGTTTGGTGGCCATATCTGAATTCTTCCATCGCCTGAGAGCACTGAGTTCCCTGTGGTCGACACGCCCTCGCCAAGAATAG 1539 0.4717 MAFSLTIEEAEQPEQETQFSSLHSHSHMLMASNSAKSTNSTTTQLEPLPPPHHNHNHHHHHPQQQQPHQIQDHQISFGMMPSSSIIPGNYLSKDSGAYDLGELDQAFFLYLDGQADPSSVQDQRPENSSSSGMRPPPTLNIFPSQPMHVAPPPSNSKASMEIPSPPNNGPKRPSGPSMARNETISAPEPPKTVKQRESNRSKAPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRLRTQGILMGGGALMGGEQGLPVGVGMGNITPDAAMFDVEYARWLEEHHKLVGELRAALHEHLHENELRLYVENCLAHYDQVMNLKSILAKTDIFHLINGIWMTWTERNFMWIGGFRPSEIIKIILSQVEPLTEQQLLGICGLQQSTQEAEEALSQGLEALNQSIFNTLTSDDLCAPPNMANYMGTMAVAMNKLSNLEGFARQADHLRHQTLHRLHQLLTTRQAAKCLVAISEFFHRLRALSSLWSTRPRQE. 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05064 512 Pfam Basic region leucine zipper 216 264 IPR004827 GO:0003700|GO:0006355
Seca7g05064 512 MobiDBLite consensus disorder prediction 116 222 - -
Seca7g05064 512 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 222 237 IPR004827 GO:0003700|GO:0006355
Seca7g05064 512 MobiDBLite consensus disorder prediction 10 49 - -
Seca7g05064 512 Coils Coil 238 265 - -
Seca7g05064 512 ProSiteProfiles DOG1 domain profile. 294 508 IPR025422 GO:0006351|GO:0043565
Seca7g05064 512 CDD bZIP_HBP1b-like 219 267 - -
Seca7g05064 512 SMART brlzneu 215 268 IPR004827 GO:0003700|GO:0006355
Seca7g05064 512 PANTHER TRANSCRIPTION FACTOR TGA9 130 511 - -
Seca7g05064 512 SUPERFAMILY Leucine zipper domain 219 263 IPR046347 GO:0003700|GO:0006355
Seca7g05064 512 MobiDBLite consensus disorder prediction 1 70 - -
Seca7g05064 512 Pfam Seed dormancy control 312 386 IPR025422 GO:0006351|GO:0043565
Seca7g05064 512 FunFam BZIP family transcription factor 218 267 - -
Seca7g05064 512 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 217 261 IPR004827 GO:0003700|GO:0006355
Seca7g05064 512 Gene3D - 218 268 - -
Seca7g05064 512 MobiDBLite consensus disorder prediction 116 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05064 Seca-Chr7 147023297 147029897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05064 88 512 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 58.691 1.34e-177 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g05064 DOG1 2.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05064 K14431 - gmx:100815176 651.358