Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05037 ATGGGAGCAAAAGAGAGCTCAGTGTCCTTAACTTTAGAGGATGGGGACAAATCTTCAAAAAAGCACTTACCTGATAATAATATTTTACCGTCTAAGAGGAATAGGGTCGACTCAGCTGATGAGCATATTATGAGATGCCTTCATGAAAAACAAGTTTGTGCAAATGAATCTGATGATTTCTTAAGAAATACAAAGAGGATTAAATGTTACACGTCTACAAATCTTGATTCCAAGAAAGAAATGCCGGTTTCTGAAATTGGAAAGGAAGTGTCAGAAAAATCAACTGATCTTTTTTTTCAGATTTCCGAGAAAGAAGGGCATCACACAGAAAAGAATAACAGGGTAACTCTGAGTGATGAATCCTTAGAGGATAGTCACATTAGGTACACTGCTTCAAATTTGTGCCAATCCAGCAGTCATAATGAAGTCTTTTATAATGAATCAAATTCTCCTTTTAATGCTTCTGTGGTGCCTCAGCATACATTTGGAGGAGAAAATTCTCAGCAACAGCAGGTTGAGTTAATTCCAACAAATGTTATACTCCCAGATGGAATTCCACATAAAATTTCTGGAAGTAAACCCTGGTCTAAACATGAAAATTTACAACTCAAAGATTCAAATGGCTCTCAGCAGACAGATGCCAGTGATAAAGCTCAAGATGATACTGGTAATGGTTGTGTGGTAGAGATGTCAGGTGATAAAATTGTGTACCAAGGTGAAAAAAATATATGCGTAAGGAAAAAGCATGAAGAGCCTGGTATGGAGTGTAGCGAAGGTGGTCAATTACAGGTTTGTGAAGCAACTACTGTCCCACTAGTGGTTCCTGAAAGTTGTCTTGTTGTGACAACTAACACTTATCCTCTGCATAGATCTGGAGTTGAACCTTGCCCTATGGATGAAACCAATGATACTACTATACATGTTGAGCCCATTCCAACAAATGACGATAATGCAAATAAAATTCAGCATATGATTAATGAATCCAAGCCTAAACAGGGGGAACCAAATGTTGCATCTTTAAATGCCTCTCAGAAGCCAGTTTCTAGTGATAAAACTGTAGTTGATGTGTCTCACAGTGAAAAGATTGATCTTGCAGCCAAAAAGCATGACACAAATGATCAAGATTTGTCAGCAATGACTGAGTCAACTGAACAAAATCTTTGCATGAAGTGTAATGAAGGCGGCCAATTACTGACTTGTAAAACAAGGTCTTGCTCAATGATGATACATAAAAACTGTCTGGGTGAATCTGCTCAGTTGGATGCAAAGGGAAACTTTTTCTGCCCATTTTGTGCATATTCTCACACTATTTCAGAATATCTTGAAGCCAAGAAAAAAGCTTCCTTGGCAAGGAAAGAATTAGCTATCTTCATTAGTAAGGGTATAAGGAATCAAGCCACAGAACATGTTCATGAATTTGGTCGACAAGAACATAGTCTTTCAAGAAAGAGTGATCAGTGTGAGCATATTCATCTCGAAAAGAAAGAAAATGACCCATTAACAGGGTATGATGAAAATAGAATAGATCATGTTGGTAAGCATGCAAATGAAGTTAAAAATCTTCATTTTAAAAGAAGTGAGCAACAAGTCCCTGTATCATATGTCTATTCATCATGCAGAGAGAAGGAAAATGTAAATAATGGAATAACAGATGATGTAAGAAGAGAAGAGGATGGGGGCAAAATGGCAAATTCAAAGAGCTTAACTGGTGGAAGGGTTGAAGAAAAAGAAGTGCCAACTAACCATGTAGATGGACACGGTGGTGATATATTTTCTTGTAGAAAAACAAATATTTTATCTGCTAATAAAAGCAATGCTCGAGAAGTTCCACAAAATATGACAAAACAACACAATATGGATGGAACAGTAAAGCCAGTTTGTGCACATGATCCTGGAAAAGAGGACATTTCTGAAGATGAATGTGAAAAGCATATCAGTTCTAGTTCTAGATACTCCATGAGATACCGTAAGCACGAAATACGATTCAAACCACAAGCATGCCCTCAGATGAGGCGAAGGGCAATTCCATGGACACATGAGGAGGAAGAGCTGTTAAGGGAGGGAATGCAGAAGTTTGGTTCCAATGGCAATGACCCAAAAATCCCATGGAAGAAAATTTTGGCATTCGGCTCTCATGTGTTTGAGAAGAATGATAAGCGTCGTACACCACAAGACCTGAAGGATAAATGGAAGAACATGTGCAAAGCTCGCTCAAAATCGAAATAA 2226 0.3792 MGAKESSVSLTLEDGDKSSKKHLPDNNILPSKRNRVDSADEHIMRCLHEKQVCANESDDFLRNTKRIKCYTSTNLDSKKEMPVSEIGKEVSEKSTDLFFQISEKEGHHTEKNNRVTLSDESLEDSHIRYTASNLCQSSSHNEVFYNESNSPFNASVVPQHTFGGENSQQQQVELIPTNVILPDGIPHKISGSKPWSKHENLQLKDSNGSQQTDASDKAQDDTGNGCVVEMSGDKIVYQGEKNICVRKKHEEPGMECSEGGQLQVCEATTVPLVVPESCLVVTTNTYPLHRSGVEPCPMDETNDTTIHVEPIPTNDDNANKIQHMINESKPKQGEPNVASLNASQKPVSSDKTVVDVSHSEKIDLAAKKHDTNDQDLSAMTESTEQNLCMKCNEGGQLLTCKTRSCSMMIHKNCLGESAQLDAKGNFFCPFCAYSHTISEYLEAKKKASLARKELAIFISKGIRNQATEHVHEFGRQEHSLSRKSDQCEHIHLEKKENDPLTGYDENRIDHVGKHANEVKNLHFKRSEQQVPVSYVYSSCREKENVNNGITDDVRREEDGGKMANSKSLTGGRVEEKEVPTNHVDGHGGDIFSCRKTNILSANKSNAREVPQNMTKQHNMDGTVKPVCAHDPGKEDISEDECEKHISSSSRYSMRYRKHEIRFKPQACPQMRRRAIPWTHEEEELLREGMQKFGSNGNDPKIPWKKILAFGSHVFEKNDKRRTPQDLKDKWKNMCKARSKSK. 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05037 741 MobiDBLite consensus disorder prediction 551 589 - -
Seca7g05037 741 MobiDBLite consensus disorder prediction 185 225 - -
Seca7g05037 741 MobiDBLite consensus disorder prediction 10 34 - -
Seca7g05037 741 MobiDBLite consensus disorder prediction 201 219 - -
Seca7g05037 741 ProSiteProfiles Zinc finger PHD-type profile. 385 434 IPR019787 -
Seca7g05037 741 MobiDBLite consensus disorder prediction 1 34 - -
Seca7g05037 741 ProSiteProfiles Myb-like domain profile. 669 734 IPR001005 -
Seca7g05037 741 MobiDBLite consensus disorder prediction 329 353 - -
Seca7g05037 741 Pfam Myb-like DNA-binding domain 677 737 - -
Seca7g05037 741 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 319 737 - -
Seca7g05037 741 MobiDBLite consensus disorder prediction 332 353 - -
Seca7g05037 741 MobiDBLite consensus disorder prediction 717 735 - -
Seca7g05037 741 Gene3D - 668 737 - -
Seca7g05037 741 SMART PHD_3 387 432 IPR001965 -
Seca7g05037 741 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 381 472 IPR013083 -
Seca7g05037 741 SUPERFAMILY FYVE/PHD zinc finger 381 435 IPR011011 -
Seca7g05037 741 SUPERFAMILY Homeodomain-like 676 739 IPR009057 -
Seca7g05037 741 CDD SANT_TRF 675 735 - -
Seca7g05037 741 SMART sant 673 736 IPR001005 -
Seca7g05037 741 MobiDBLite consensus disorder prediction 717 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05037 Seca-Chr7 145983885 145991551 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca7g05037 Myb_DNA-bind_6 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05037 - - ccaj:109810464 857.055