Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05033 ATGGCCGAATCGATCCTCTTTAACGTTGCAGAGTCCTTCATCGGGAAGCTTGCTTCTGGTGCTGTTGAAGAAGCTTCTCTAGCACTCGGTGTGTATGACGATCTGCAAGAGATCAAAGACATCGTGTCATTCATCAAAGCTGTGCTGTTGGACGCTGAGCAAAAGCAGCAGAAGAACCACGAGTTGCGTGAATGGCTGAGACAGATTAAGCGTGTCTTCTCCATTGCCGAAGACATAATCGATGATTTCGAGTGTGAGGCGTTACGGAAGAAAGTGGTCAAAGCTTCTGGTAGCTTTACAAGGAAGGTACGCCGTTTCTTCTCAAATTCTAATCCTCTCGTTTACCGTTTTAGAATGGCACATCAGATTAAAAACATCAAAGAGAGATTAGACAAGGTTGCAGCTCATAGGAATAATTTTAGCCTTCAAATCAATGACAGTGATAATCGTGTTGTGCAAAGGCGGGAATTGACTCATTCCCATGTAATTGATTCAGATGTTATAGGAAGGGAACATGACAAAGAAAAAGTCATTAAGCTCTTATTGCAAGATGGTGATGATGATAAAGTTCTCTCTGTTATTCCCATTGTGGGAATAGGAGGCTTGGGAAAGACAACACTTGCAAAGACCTTGTTCAATGATAAGAGTGTGCGTGAGTCTTTCCAAAGGAGGATGTGGGTGTGTGTCTCTGATGATTTTGAACTTAAGCATTTGCTTGTTAAAATCCTCAATTTTGCTCCTACATCTGCTAGTCAAGAGAACTTTAAAAATTTTAATGTCGAGCAACTACAAAATCATCTTAGAAAAACACTTGCTGATCAAAAGTTCTTGCTCGTCTTGGACGATGTATGGAACGAGGATCGTGTTAAATGGGTTGAGTTCAAGGATTTAATACAAGTAGGTGCCCCAGGAAGTAGAGTCCTAGTGACTACACGTAGCCACTCAATTGCTACCATGATGGGCACTAATTCATCATACATCTTGCAAGGTCTTTCTGAAAAGGATTCCTTGTCTGTATTTGTCAAATGGGCTTTTAAGGAAGGGGAAGAGAACAGATATCCAGAATTGTTGGAGATTGGGAAACAAATTGTGCGAAAATGTGGAGGGCTTCCATTGGCCCTAAGGACATTAGGAAGTTCACTATTCTTAAAAGTTGATATGAAAGAGTGGAAGTTTGTTAGGGACAATGAGATTTGGAATTTACCACAAAATGAAAATGATATTTTACCTGCTCTTAAATTAAGTTATGACCAGTTACCTTCATATTTAAAACGATGTTTTGCTTGCTTCTCCCTGTTCGAAAAGGACTTTGATTTTTCTAATTTTAATGTTACTGTGCTTTGGGAGGCACTGGGTTTTCTTCCATCACCAAAGAAAGGTAAAACACTAGAAGATGTTGGTAATCATATTTTGCATGAGCTGCAATCAAGGTCTTTTCTTCAAGATTTTATTAATTATGGCAGTGTTTGCACATTTAAACTTCATGACTTAGTGCAAGATCTGGCAGTGTATGTTGCAGAAGATGAGTTTCAATTGTTGAATACCCCCAATCAGAATATACCTGAGAATATCCTGCACTTGTCATTTAATAAAAATGATTTGCTTGGCCAAGCTTCCATTCCTGCAGGTCTCAGAACCATACTCTTTCCTATGGGAGCTGACAATGAAACTTTCTTGAATACAGTGGTGACAGAGTGCAAATACTTGCGGGTTCTGGATTTGACTGATTCTGAATATGAGAACTTGCCCCACACCATTGGTAAGTTGAAACATTTAAGATATATCACTCTTGAGCATAATGAAGAACTTAGGAGACTCCCTGATTCAATATGCAAACTTCAAAATTTGCAAGCTTTGAATCTCATTGGATGCACAAGTCTACAAACATTGCCCAAAGAAATAGGAAACTTGATCAGCCTCCGGCAGTTGCATATAACCACAAATCAATCTAATTTTCCAGACAAAGAGATTGCAAAATTGACTTCTCTGGAAATTTTATCTTTTATTGATTGTGGCGATTTGGAGTCATTGTTTGAAGGGATACAACTTCCAAGTCTTACATTGTTGAACATTGAGTCTTGTGGGAGTCTAAAATCATTGCCGCTTCATGTTATTCCAAACTTAGAGAGTTTGATCATTGTAAACTGCCCTAAGTTGGAATTGTCAATGGGTCGTGACAACCAAATCCCTGAGTTAAGGTTAAAGTTACTATCTCTTGATTCCTTGCCTCAACTGGTGACTTTTCCTCAATGGTTGCAAGGATCTGCCAACACATTACATTCCTTGCGAATCGATGATTGCGACAATCTTGAGGAGCTCCCTAAGTGGCTATTAACTTGGAATTGTTTCAAAACACTCTCAATTAAAAATTGTCCAAAATTGATTTCACTCCCTGATGATGTGCACCGCCTCCCTAACCTTGAATATTTAGAAATTAAAGGTTGTCCTGAATTATGTAGAAGATGTCTCGGACAGGATTGGCCAAAGATATCGCACATCAAAGAAGTTAGGATTGAATCAGTAGAATCGCAAGATTAA 2538 0.3901 MAESILFNVAESFIGKLASGAVEEASLALGVYDDLQEIKDIVSFIKAVLLDAEQKQQKNHELREWLRQIKRVFSIAEDIIDDFECEALRKKVVKASGSFTRKVRRFFSNSNPLVYRFRMAHQIKNIKERLDKVAAHRNNFSLQINDSDNRVVQRRELTHSHVIDSDVIGREHDKEKVIKLLLQDGDDDKVLSVIPIVGIGGLGKTTLAKTLFNDKSVRESFQRRMWVCVSDDFELKHLLVKILNFAPTSASQENFKNFNVEQLQNHLRKTLADQKFLLVLDDVWNEDRVKWVEFKDLIQVGAPGSRVLVTTRSHSIATMMGTNSSYILQGLSEKDSLSVFVKWAFKEGEENRYPELLEIGKQIVRKCGGLPLALRTLGSSLFLKVDMKEWKFVRDNEIWNLPQNENDILPALKLSYDQLPSYLKRCFACFSLFEKDFDFSNFNVTVLWEALGFLPSPKKGKTLEDVGNHILHELQSRSFLQDFINYGSVCTFKLHDLVQDLAVYVAEDEFQLLNTPNQNIPENILHLSFNKNDLLGQASIPAGLRTILFPMGADNETFLNTVVTECKYLRVLDLTDSEYENLPHTIGKLKHLRYITLEHNEELRRLPDSICKLQNLQALNLIGCTSLQTLPKEIGNLISLRQLHITTNQSNFPDKEIAKLTSLEILSFIDCGDLESLFEGIQLPSLTLLNIESCGSLKSLPLHVIPNLESLIIVNCPKLELSMGRDNQIPELRLKLLSLDSLPQLVTFPQWLQGSANTLHSLRIDDCDNLEELPKWLLTWNCFKTLSIKNCPKLISLPDDVHRLPNLEYLEIKGCPELCRRCLGQDWPKISHIKEVRIESVESQD. 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05033 845 Gene3D - 10 124 - -
Seca7g05033 845 Gene3D - 422 503 IPR036388 -
Seca7g05033 845 Pfam Rx N-terminal domain 11 98 IPR041118 -
Seca7g05033 845 PANTHER DISEASE RESISTANCE PROTEIN RP 38 818 IPR044974 GO:0006952
Seca7g05033 845 Gene3D - 330 420 IPR042197 -
Seca7g05033 845 Gene3D Ribonuclease Inhibitor 507 729 IPR032675 -
Seca7g05033 845 Gene3D Ribonuclease Inhibitor 730 833 IPR032675 -
Seca7g05033 845 Gene3D - 148 328 IPR027417 -
Seca7g05033 845 Pfam NB-ARC domain 170 417 IPR002182 GO:0043531
Seca7g05033 845 PRINTS Disease resistance protein signature 611 627 - -
Seca7g05033 845 PRINTS Disease resistance protein signature 270 284 - -
Seca7g05033 845 PRINTS Disease resistance protein signature 193 208 - -
Seca7g05033 845 PRINTS Disease resistance protein signature 367 381 - -
Seca7g05033 845 SUPERFAMILY L domain-like 493 831 - -
Seca7g05033 845 Pfam Leucine rich repeat 568 623 IPR001611 GO:0005515
Seca7g05033 845 CDD RX-CC_like 12 134 IPR038005 -
Seca7g05033 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 429 IPR027417 -
Seca7g05033 845 FunFam Probable disease resistance protein At1g61300 149 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05033 Seca-Chr7 145929935 145936981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05033 191 783 WRKY Transcription Factor Family AT5G45050 24.282 2.80e-18 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05033 - - gmx:100780033 1072.38