Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05030 ATGCAGGAAAGAGAACAAGCACTGAGGTCATTCAAGAGTGGAAACACACCAATTCTAGTGGCAACGAAAGTTGCAACACGTGGTCTCGATATTCCAAGGGTAGCACATGTGGTAAATTTTGATCTCCCCAATGACATTGATGATTATGTGCACAGGATAGGAAGAACAGGGCGAGCTGGTAAAATGGGATTAGAAACAGCCTTCTTCAATGACAGTAATTTGTCCTTGGCTAAACCATTGGCTGATCTGATGCAAGAGGCAAATCAAGAAGTACCTGGAATTGGAGAAATAAGTACCCTAACTGAGGCAACATATCGTGACCTTTCAGGTGGTGAGCTTCAAAGGTTTGCTATTGCCGTTGTTGCCATCCAAAATGCTGAGATATACATGTTTGATGAACCTTCTAGCTTTCTTGATGTGAAACGGAGGCTGAAAGCTGCCCAAGTTACTCGATCATTGCTTAGGCCTAATAGCTATGTAATTGTTGTAGAGCATGATCTTAGTGTCTTGGACTACTTATCAGACTTTATTTGCTGTTTATATGGCAAACCTGGTGCATATGGAGTGGTGACTAGGCTTCCTTGA 585 0.4239 MQEREQALRSFKSGNTPILVATKVATRGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLETAFFNDSNLSLAKPLADLMQEANQEVPGIGEISTLTEATYRDLSGGELQRFAIAVVAIQNAEIYMFDEPSSFLDVKRRLKAAQVTRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTRLP. 195
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05030 194 CDD SF2_C_DEAD 2 69 - -
Seca7g05030 194 SMART helicmild6 1 60 IPR001650 -
Seca7g05030 194 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 91 191 IPR013283 -
Seca7g05030 194 Gene3D - 1 73 IPR027417 -
Seca7g05030 194 Pfam Helicase conserved C-terminal domain 2 60 IPR001650 -
Seca7g05030 194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 182 IPR027417 -
Seca7g05030 194 Pfam ABC transporter 84 135 IPR003439 GO:0005524
Seca7g05030 194 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 99 IPR001650 -
Seca7g05030 194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 90 IPR027417 -
Seca7g05030 194 Gene3D - 74 186 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca7g05030 Seca-Chr7 145862597 145863657 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05030 2 92 Eukaryotic Initiation Factors Gene Family AT3G19760 34.066 8.14e-17 75.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05030 K06174 K11594 cpap:110819753 168.703