Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05024 ATGGAATGGAATTATGATGGAAGCAAACAGACTCATCGCTTGCTCCTTCCTCCTTTACCAATATCTTCATTTATGCCAACAACTTTAGCAAGAGCAGATAATCCTATGAACCCTACCCCACGTTGGGAAAAAGGAACCCTGCTTGGCAACGGCATCTTTGGAGATGTTTATGTTTGCTTCAATAAGGAAACTGGCGAAATGCGTGCCATGAAAGAGGTTACTTTATTTTCAGATGATGCTAAGTATAAGGAAAGTGCTAAGCAATTAGTGCAGGAAATTACTTTATTCAGCAGTTTAAGGCACCCCAATATTGTGCAATATTACGGTTCTGAAGTAGTTGGCGACAAGCTTTACATATTCCAGGAGTACATAGCTGGAGGCTCCATACATAAACTTCTTCAAGAATATGGGCAATTTGGTGAAACAGCTATTCGGAGTTTCACTCAACAAATTTTGTCAGGCCTTGCTTATTTACATGTTAAAAATATAGCCCACAGAAACATTAAAGGAGCAAATATATTAGTAGATCCTAATGGCAGGGTCAAGTTGGCTGACTTTGGCTTGGCAAAGCATGTGAGCTTGGTAAGAAAAACTATCCATTTATTTGCATTTTAA 615 0.3886 MEWNYDGSKQTHRLLLPPLPISSFMPTTLARADNPMNPTPRWEKGTLLGNGIFGDVYVCFNKETGEMRAMKEVTLFSDDAKYKESAKQLVQEITLFSSLRHPNIVQYYGSEVVGDKLYIFQEYIAGGSIHKLLQEYGQFGETAIRSFTQQILSGLAYLHVKNIAHRNIKGANILVDPNGRVKLADFGLAKHVSLVRKTIHLFAF. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05024 204 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 33 192 - -
Seca7g05024 204 ProSiteProfiles Protein kinase domain profile. 42 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05024 204 SUPERFAMILY Protein kinase-like (PK-like) 26 195 IPR011009 -
Seca7g05024 204 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Seca7g05024 204 Gene3D Transferase(Phosphotransferase) domain 1 40 201 - -
Seca7g05024 204 Pfam Protein kinase domain 43 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05024 Seca-Chr7 145741551 145743239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05024 6 193 MAP Kinase Kinase Kinase AT1G63700 64.851 6.45e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Seca7g05024 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05024 K20717 - gmx:100819762 282.337