Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05019 ATGAAGTTCAAGGATGGGTACATGATTTCTTCTGGGCAACCAGTCAAGGATTACATTGACTCTGCAGTGAGGCGTGTGCTCCTCAGACATGGTGTTCTTGGTATCAAGGTGAAGATCATGCTTGATTGGAATCCTAAAGGGAAACAGGGTCCTAAAACGCCCCTCCCTGATATTGTCACAATCCACGCTCCAAAAGAGGAAGAAGAATACACCCAGCCTGCTGCTATTTTGGTTGATCTGGAGTAG 246 0.4634 MKFKDGYMISSGQPVKDYIDSAVRRVLLRHGVLGIKVKIMLDWNPKGKQGPKTPLPDIVTIHAPKEEEEYTQPAAILVDLE. 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05019 81 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 1 53 - -
Seca7g05019 81 SUPERFAMILY Ribosomal protein S3 C-terminal domain 1 42 IPR036419 -
Seca7g05019 81 Gene3D - 1 71 IPR036419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05019 Seca-Chr7 145627192 145627557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05019 1 77 Cytoplasmic Ribosomal Protein Gene Family AT5G35530 74.026 1.86e-39 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05019 K02985 - gmx:100795581 147.517