Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05018 ATGGTTTCGCTATCAACATGGTTTCGGTACTTTCTTTACAAGGCAGAATACTCCATTTCTCTCGGCTTGAAGAGCAGTAAAGGAGGTCAAATTACAGGAGAGACACGTGATGTTGTTTGCAAGAACTTCTTTCAAGGAAAGTTGACCTACTTGCACTGGAATAAAGGAGAGGAGATGGCCCCTACTATTGCTGGAAAAGGAGCAACTCTTCTTGTTCGGAAATTACCAGTTGCAGATCCAACGAGTGTTTTTGTAGGAGATGTTGTGGTTGTGAAGGACCCTGAGAAGCCAGATAACTACCTAGTCAGAAGATTAGCTGCCATTGAAGGTTATGAAATGGCTTCTACTGATGAAAAGGATGAACCTTTTGTTCTTGAGAAGGATCAATGCTGGATAGTGGCTGAAAATGAAAAATTGAAAGCTAAGGAAGCAAATGATAGTCGAACGTTTGGTCCAGTACACATGACAGACATTGTAGGTAGAGTCATATACTGCCTACGAAGTGCAGTAGACCATGGCCGTATACAAAACAGTTATTTCAGCATGCGAAAGGATTCACCAGTATTGGAAGTGGAACTTGATGTTGATGAGATGGCAAAGAATCACAAAGCCTAA 615 0.4163 MVSLSTWFRYFLYKAEYSISLGLKSSKGGQITGETRDVVCKNFFQGKLTYLHWNKGEEMAPTIAGKGATLLVRKLPVADPTSVFVGDVVVVKDPEKPDNYLVRRLAAIEGYEMASTDEKDEPFVLEKDQCWIVAENEKLKAKEANDSRTFGPVHMTDIVGRVIYCLRSAVDHGRIQNSYFSMRKDSPVLEVELDVDEMAKNHKA. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05018 204 Gene3D Umud Fragment, subunit A 49 183 - -
Seca7g05018 204 SUPERFAMILY LexA/Signal peptidase 56 175 IPR036286 -
Seca7g05018 204 PANTHER OSJNBA0068L06.9 PROTEIN 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05018 Seca-Chr7 145618034 145624700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05018 59 173 MADS-box Gene Family AT1G29960 27.642 6.63e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05018 - - gmx:100500100 331.643