LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca7g05016	ATGGCAGCTGTGGTTGTAGTAACAGGTCTTGTTGGAGCAAATTTTGTGCAAGCAACTCTTGATAAACTCAGATTTTGTGATCCAATTGCTCGAGGAATAGCAACTGCTTCTAGGTGGAGTAACAAAGGCAAGTTCATCCTTATCTTGGTCATGTTCTTTGGGAGGCTCAAGAAATTCAATATGAAAGTAAGTTTGTTCTCAAGAAGCTGCATGTATGGGTATAATAAGGGCAGATGCAGGAAGCTTATTGGTACATTCTTTGCGAGCAGTTCGGGTAGAGAGTTTGTAGCAGGAGGCTTTGGAGGCACTGCTGGTATAATCTCTGGTTATCCATTGGACACCCTCCGAATCAGGCAACAGAGCTCAAAAACTGGCTCTGCCTTCACCATCCTTAGACACATGTTTAGATTAGATGCAGATACACCCTCACAAACTGCAGTGGAACGAGGGAATAGGATCACATGGGGGTTTATCCTTAATTTTGAATCGTATCTTATCAACATGATGCTGCATCTTAGATTAGTTCACCAAATATCCTCAACTTTCCCATCTTTGGGATGGGACATGGCTTCTGAGCTCTGCCTCTCTCAACTTCCCTCATTAGTTGAGGATCCTAGTGCAATATTCCAGAATAAGGAAAGAAACCTCTCCTCCAAAGCGCCAATACTTGTGTCCATAATCTCCTATACTGGGTATAAGAGCTTATCACTGTCATCATCACCACTGAAAATGAATGTTCAGAATGCATTTACCTTGTATAGCATGGTTAGCTTCTATACAGCTAGTGAAGTAGATGATGGTTCTGATAAGACTCCAGAACACCACGCCGCAGTCATTGGTCGTCGTAAGCGCTGTTACGATCTTCATCGCAGTGGCTTGGTTTGTCCCTCTTCACCTATGCTGCAGCTAGCGCTGCCTCCACATCTCACTATGTACCGTCCAAGGCCCATCGTTGAGCGACCGTTACCATCTCTTCAAATAAGCATGACACAGATGAAGACTGTGAAGGCGATTAGCCTTGGTAGGACGCATTTGTTTGATGGCTGCCCATGA	1053	0.4435	MAAVVVVTGLVGANFVQATLDKLRFCDPIARGIATASRWSNKGKFILILVMFFGRLKKFNMKVSLFSRSCMYGYNKGRCRKLIGTFFASSSGREFVAGGFGGTAGIISGYPLDTLRIRQQSSKTGSAFTILRHMFRLDADTPSQTAVERGNRITWGFILNFESYLINMMLHLRLVHQISSTFPSLGWDMASELCLSQLPSLVEDPSAIFQNKERNLSSKAPILVSIISYTGYKSLSLSSSPLKMNVQNAFTLYSMVSFYTASEVDDGSDKTPEHHAAVIGRRKRCYDLHRSGLVCPSSPMLQLALPPHLTMYRPRPIVERPLPSLQISMTQMKTVKAISLGRTHLFDGCP.	351

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca7g05016	350	Gene3D	Mitochondrial carrier domain	59	139	IPR023395	-
	Seca7g05016	350	SUPERFAMILY	Mitochondrial carrier	93	135	IPR023395	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca7g05016	Seca-Chr7	145575299	145586909	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca7g05016	86	139	Antiporters	AT1G79900	76.364	9.25e-09	54.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca7g05016	K15109		-	zju:107404833	82.8037