Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04978 ATGGAACAAACTGAAACTAACAATACTGCTGCTGTTGATCCCAAAAATTCTAAATCCCCCAATAAAGATAATTTGGATTCTCATCAGATTCCTGAAGGTTACAAAAGGATAAGTGAACTAACAGATGAGGATATCAGAGGGCTTGAGTTTGATACAGAAGAGGATGCATATGATTTCTACTGTGAGTATGCTAAATTCATAGGATTTTCTGTTAGGAAAGGTGATGTCTATAGAAATTGTAATGGTTCAATTACAATGAGGCAATTGGTTTGTAATAGAGAGGGAGAGAGAAGTGAGAAGCATCTTAATAGGACTGATAGGCTTAGGGAGGCAAAGGCCTTGACCCGAACTAAGTGTAATGCAAGGCTCCGTGTTTCTTTAGATTATAGAATTAGAAAGTGGAGGGTTGGAATCTTTGAGCCAGCTCACAACCATGAATTGACTCCTGCAAGTATGATACATTTGCTACCTGCTTATCGTGGGTTGAGTGTAGCTGATAAGGCACAAGTTGACGGTCTACATCATTATGGTGTTAAGACTTGTCATATAATGGGTCTTATAATGGGTCAAAAGGGAGGCTATTTTGATCTTGGTTTTTGTAAGAAGGATTTGTACAATCATATTGATAAAGAGAATCGGGCAAAAATAGAGGATGGGGATGCTTTTGCTGCGTTGTGTTACCTTCAATCAAAGTTTGACAACAATCCAATGACATTCATAAAGTTTACAACCACTGAAGATCATAAACTTGAAAACTTGTTTTGGTCTGATGTAGGGAGTAGAATTGATTATATTTGTTTTGGTGATGTAGTTTCTTTTGACACAACGTATAAGAAAAATAAGTATAATAGGCCATTAGTAATTTTTTCTGGTTATAACCATCATGGTGAAACCACTATTTTCGGTTGTGCTCTTGTTGGTGATGAGAAGATTGAAACCTATAAATGGGTGCTTGAAGCATTTCTTGAAGCAATGTTCAATAAAGTTCCTAAGGTTGTGGTTACTGTTGGAGATGGTGCAATGCGTGAAGCTATCAGATCTGTTTTTCCTGGTGCTCTTCACAGGTTATGTGCATGGAACCTTCACCAAAATGCTTGTGAGAATGTTAAGGGCCTGTTTGGTTTGCATTTTCATTTCCTGTTTTCATTTTCTGGAATTTTACAAAGGAAAAACTGGAAACGCTGGAAACAAAAATTTGTTGTTTCCAGCATTTCCAGTTTTCCCTTTGTAAAATTGCAGAAAACAAGAAACAAAATGAAAACAGGAAATGGAAACAGGAAATGA 1284 0.3676 MEQTETNNTAAVDPKNSKSPNKDNLDSHQIPEGYKRISELTDEDIRGLEFDTEEDAYDFYCEYAKFIGFSVRKGDVYRNCNGSITMRQLVCNREGERSEKHLNRTDRLREAKALTRTKCNARLRVSLDYRIRKWRVGIFEPAHNHELTPASMIHLLPAYRGLSVADKAQVDGLHHYGVKTCHIMGLIMGQKGGYFDLGFCKKDLYNHIDKENRAKIEDGDAFAALCYLQSKFDNNPMTFIKFTTTEDHKLENLFWSDVGSRIDYICFGDVVSFDTTYKKNKYNRPLVIFSGYNHHGETTIFGCALVGDEKIETYKWVLEAFLEAMFNKVPKVVVTVGDGAMREAIRSVFPGALHRLCAWNLHQNACENVKGLFGLHFHFLFSFSGILQRKNWKRWKQKFVVSSISSFPFVKLQKTRNKMKTGNGNRK. 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04978 427 Pfam MULE transposase domain 270 364 IPR018289 -
Seca7g04978 427 Pfam FAR1 DNA-binding domain 58 148 IPR004330 -
Seca7g04978 427 MobiDBLite consensus disorder prediction 1 26 - -
Seca7g04978 427 PANTHER OS01G0519700 PROTEIN 43 371 - -
Seca7g04978 427 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04978 Seca-Chr7 144873897 144875180 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g04978 MULE 1.9e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04978 - - ccaj:109792835 451.055