Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04964 ATGGCTTCTTCCTCATCAAATTCAAAGCATGATGTTTTTCTCAACTTTAGAGGAGAAGATACTCGTTGCACTTTCACAAGCCATCTCTACGCTGCCTTGTGTCGAAATAAAATCCACACATTCATTGACGACGAGGAAATTAAGAGAGGAGATAAACTGTCACCAACACTTCTTTCAGCTATTGAAACCTCAAAAATTTCAGTAACAATTTTCTCACAGAATTATGCTTATTCTGCGTGGTGTTTGGATGAGCTCCACAAGATCATTGAGTGCAAAGAGAAGAAAAAACTTGTTGTGATTCCTGTTTTTTATCACATCGATCCATCGCATGTAAGACACCAGAGGGGAACTTATGAAGATGCACTTACCAAACACGAGGAGCGTTTCAGGGACAATCTAATCAAGGTACATAAGTGGAGAACTGCTCTACGTGAAGCAGCCAACTCAGCAGGATGGGATTCCTCCAATATAAGGCTGGAGTCCGAACTAGTTGAAAAAATTGTTGAAGATATATTACAGAAATTGAATTGTATGAGCCCACATGTTCCAAAGGGGCTTGTTGGAATTACTAGACACATTGCACATGTGGAATCATTGTTATGCACAGGGTCAACTAATGTACGTATTGTTGGAATCTGGGGCATGGGTGGGATAGGTAAAACAACCATTGCAGATGCTGTGTGTGCAAAACTCTCTTCTCAATATGAGAGATATTACTTTGTTGCCAATGTGAGGGAGGAATGGAAAAATCGTAGAGAAAATGATTTACGGAACAAACTTCTTACTGGAATATTAGGGGACCAAAATTTGTATATTAGTTCCCCTGCTATGAGTTCCGCTTTTGTTGTAGAAAGGCTTCAACGTAAAAAGCTCCTCATCGTTCTTGATGACGTGAGTGATTCAAAACAAATAGAATATCTTGTGGGAGAGAAACATTGGCTTGGACCTGGTAGTAGAGTCATAGTGACAACCAGAAATAAAGATGTGTTTACCAGAGGAGTTGATGGTGTTTACCAAGTGATGGAGTTGAATTTTCATGAAGCACTAGAGCTTTTTAGCTTGAATGCGTTTCAACAAGACCATCCAATGAGGGAATACAGACACTTGTCAGAAAGGGCAGTAAACTATGCCAAGGGCATTCCTTTAGCTCTTAAAGTTCTTGGTTCTTATCTTTATTCCAAACTACCAAAAGATTGGGAAAGTGCATTGGAAAAACTAAAGAAAATTCCCAGAGTTGAAATTTATGATGTGCTAAGATTGAGTTATGAAGGATTAGACCCTGAAGAGCAGAATATATTTTTAGATATTGCATGCTGTTTGAAAGGAGAGACAAAAAGCCGTATAACAAGTATTTTAGATGGCTGCGGCTATTCTACAGATATTGGGATCACAAGCCTTCTAGATAAGTCTCTTATAACTGTTTCTAAATACCACACGGTCCAGATCCATGATTTGATACAAGAAATGGGTTGGCATATCGTTCGTGAAGAATCAATGAAAAAGCCTGGAAAACGAAGTCGGCTGTGGGATCCCAATGAAATTTATGATGTCCTCAAGCATAACAAGGGTACTGACAGTATTGAAAGCATAGTGTTGGACATGTCTCAAATCAAAGATGTGACAATAAGCCCTCAAACTTTCTTCAAAATGCACAAGCTAAGGCTTTTGAAATTTTATATGACCTCATGCGATAAGAGAAGCAATGTACATATTTCCAGAGGTCTAGAATGTATGCCTGATGAATTAAGCTATCTCCGATGGGACTGTTTTCCATTGAAATCCTTGCCACCATCGTTTTCTGTAGAGAAGCTGGTTGAACTTGATCTAAAACATAGCCTCGTTGAAAAACTATGGGACGGAATGCAGGATCTTCTGAATTTGAAGTCATTGTACCTTGGTGGTTGCAAGCGCCTGACTGAGCTCCCAGATTTCTCTATGGCCTCAAAACTTGAAGAAGTACATCTTGATGATTGTACAAGTTTGTTGAATGTTCCTTCATCCATTTTGTCACTTGATAGTCTTTTTGCACTGAATCTGACAGGCTGTAAACAGCTTCGTAACATTCAAAGTGAGAAGCAATCTCGATCTCTTCGATGGTTTAATCTGAGGGGGTGCTCAAGACTTGTAAAGTATTTTTTTTCTTCAGAGAAATTGGAGTACCTGATCTTAGATGGCACTGCAATTGAAGAACTGCCCTCATCAGTTGGACAACTCAAGGACTTTTCTAGCATGTATCCCCAGAATCTTCCAAATATCCTCTATGAGAATGGTTCAGAATCTTCAGATTGTTCCGTTCAGCTTCTTGACTACCCAAAACTTGAGAAGTTACCTGCAATATTTGACACCTCACTGTCTATTACAACTCTCTGTCTGGATAATTGTTTAAATTTATCAAAACTCCCTGACAACCTTGGCCTCTTATCAAAATTAAACAAACTTTCATTAAGAGGAAGCAATATTGAGAACTTTCCTGGTAGCATAAAAGATCTTTCTCAGTTGAGAGTTCTCAATGTAAGCAACTGCAGGAGGCTTCGTTCCTTGCCAGAGCTCCCATTCTTGTTACAGGACTTGAATGCAAGTAATTGCATTTCCCTAGAAACAGTATCAAATTTAGGGATCACGATGTTGCAAGATTCTTTTGGTAGACTGAAGAAGAGCTCATTGCTCAGACAGATTCAAGAGGAAGAAAAAATGTATATTCGTAATCGTGACTATTTGGGAAGATTTGAATTTCATAATTGCATAAAGTTGGACCAGATTTCATGCAAGACTGTTATGGAAGAAACACTAATTAGAATTCAGCTAGCTGCCTACCTATCAACATTGATTGAAGAATGTTATGATCCTTATTGTCAAGCTGATGAAGTTTCTAGAAACTTTGACCCTGAAGATTTTACATATATTTCCCGTCCAGTTTATATTATTTTGCCGGGAAATGAAGTGCCAAATTGGTTCATGCATAAAGGAACAGACTCCCCAATCATAACTCTAGAACTTTCTCCACGGTGGCATCGTTATTTCAATTACCTGGGCTTTGCTTTCTGCCTTGTTCTAGGACCACCATCCCACTCAAATAGGAAGAAAAACCATCACATTGGTTTTGTGGCAGGGTGTAGATACTATTTTGAAGGCAAATATGCTGGAACTTGCATTATAAAGTCGTCCTGCAATGATGCTGAATCAGATCAGGTATGGCTTTGGTACGATAAATTGTTAAAAGCTGAAGAGGAAACAAGCAATATTGCTTCATATAAGATGCAGGTCTCATTTGAATTTTTTGTAAGGCCTCGCAGTTCAGGACTTGTTGTGAAACAATGCGGAATTCGACCATTATATGCTCCATATGACATCATGCAAAACTCAAATGAAGAAGACGGAAAAAGAGAAAGTAAGATACCTTATGTTGAGTCTGAAGTCAACTCAATGCTAAGGAATTATGTGCTGTTTCGCGAGTATGGTCATCCTCCCGACGGCCTTAGATTGCCATCACAACAAGAAACAATTTCTGGGTATCCTGATCGACATGTTGGGGAATCCTTTCTGTTAATTCATTGTGCCAAGAGTGTTGATGTACTTAGAATGGAACACAAGTGCTTGAGTATTGGAGCTGAAGTATTTGTGTATTTTGGCCGTGTTGGTAGTCACCACCTACGTGGTGTGTCCACACAACGTGCTCTGCGGTATTTAGCACAACTGCTTATGGATGACTATTGTAATTTTGGTAAACTCCTAGACAACATCAACTTCTTTTCATCGCTAAGGAGATTGTCTCTAAATGGTTGCAATGTTGAGACCCTGCCTGCTAGCATCGAGCATCTTTCAAGGCTGGAACATCTTTTATTAAATGAATGTAAGAGGCTTAGGTCTCTCCCGAAGCTTCCGAGGTCCCTTCAATATTTATTTGTCCAGAAGTGCACATCTCTGGAAACAGTTGAATTGGCTAAGAGCAAGAGGATGGAAGTTCATGGAAAATTTCCCAATGAAATGGCAGGTATGGTATTCGAAAAAGTATCGAGAATACAAATTACTGACCCAGGAAGAAGGGTTGCAGACTGGTCCATGCAAAGGTTAACACGAGATTTGATGGCCATTGAATTCTATGTTGCTTCATGTACTGAGCCATTGAGTGTCGGGTGTGAAAGCGGTACATTGAAAGTTAACATCACGTGA 4170 0.3938 MASSSSNSKHDVFLNFRGEDTRCTFTSHLYAALCRNKIHTFIDDEEIKRGDKLSPTLLSAIETSKISVTIFSQNYAYSAWCLDELHKIIECKEKKKLVVIPVFYHIDPSHVRHQRGTYEDALTKHEERFRDNLIKVHKWRTALREAANSAGWDSSNIRLESELVEKIVEDILQKLNCMSPHVPKGLVGITRHIAHVESLLCTGSTNVRIVGIWGMGGIGKTTIADAVCAKLSSQYERYYFVANVREEWKNRRENDLRNKLLTGILGDQNLYISSPAMSSAFVVERLQRKKLLIVLDDVSDSKQIEYLVGEKHWLGPGSRVIVTTRNKDVFTRGVDGVYQVMELNFHEALELFSLNAFQQDHPMREYRHLSERAVNYAKGIPLALKVLGSYLYSKLPKDWESALEKLKKIPRVEIYDVLRLSYEGLDPEEQNIFLDIACCLKGETKSRITSILDGCGYSTDIGITSLLDKSLITVSKYHTVQIHDLIQEMGWHIVREESMKKPGKRSRLWDPNEIYDVLKHNKGTDSIESIVLDMSQIKDVTISPQTFFKMHKLRLLKFYMTSCDKRSNVHISRGLECMPDELSYLRWDCFPLKSLPPSFSVEKLVELDLKHSLVEKLWDGMQDLLNLKSLYLGGCKRLTELPDFSMASKLEEVHLDDCTSLLNVPSSILSLDSLFALNLTGCKQLRNIQSEKQSRSLRWFNLRGCSRLVKYFFSSEKLEYLILDGTAIEELPSSVGQLKDFSSMYPQNLPNILYENGSESSDCSVQLLDYPKLEKLPAIFDTSLSITTLCLDNCLNLSKLPDNLGLLSKLNKLSLRGSNIENFPGSIKDLSQLRVLNVSNCRRLRSLPELPFLLQDLNASNCISLETVSNLGITMLQDSFGRLKKSSLLRQIQEEEKMYIRNRDYLGRFEFHNCIKLDQISCKTVMEETLIRIQLAAYLSTLIEECYDPYCQADEVSRNFDPEDFTYISRPVYIILPGNEVPNWFMHKGTDSPIITLELSPRWHRYFNYLGFAFCLVLGPPSHSNRKKNHHIGFVAGCRYYFEGKYAGTCIIKSSCNDAESDQVWLWYDKLLKAEEETSNIASYKMQVSFEFFVRPRSSGLVVKQCGIRPLYAPYDIMQNSNEEDGKRESKIPYVESEVNSMLRNYVLFREYGHPPDGLRLPSQQETISGYPDRHVGESFLLIHCAKSVDVLRMEHKCLSIGAEVFVYFGRVGSHHLRGVSTQRALRYLAQLLMDDYCNFGKLLDNINFFSSLRRLSLNGCNVETLPASIEHLSRLEHLLLNECKRLRSLPKLPRSLQYLFVQKCTSLETVELAKSKRMEVHGKFPNEMAGMVFEKVSRIQITDPGRRVADWSMQRLTRDLMAIEFYVASCTEPLSVGCESGTLKVNIT. 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04964 1389 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 152 IPR035897 -
Seca7g04964 1389 ProSiteProfiles TIR domain profile. 8 175 IPR000157 GO:0007165
Seca7g04964 1389 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 708 IPR044974 GO:0006952
Seca7g04964 1389 Gene3D Ribonuclease Inhibitor 469 749 IPR032675 -
Seca7g04964 1389 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 177 - -
Seca7g04964 1389 Gene3D - 342 426 IPR042197 -
Seca7g04964 1389 Gene3D - 177 335 IPR027417 -
Seca7g04964 1389 SUPERFAMILY L domain-like 1217 1312 - -
Seca7g04964 1389 Pfam TIR domain 9 181 IPR000157 GO:0007165
Seca7g04964 1389 Pfam C-JID domain 976 1113 IPR045344 -
Seca7g04964 1389 Gene3D Ribonuclease Inhibitor 1205 1336 IPR032675 -
Seca7g04964 1389 Gene3D - 3 176 IPR035897 -
Seca7g04964 1389 Pfam NB-ARC domain 193 412 IPR002182 GO:0043531
Seca7g04964 1389 PRINTS Disease resistance protein signature 828 844 - -
Seca7g04964 1389 PRINTS Disease resistance protein signature 209 224 - -
Seca7g04964 1389 PRINTS Disease resistance protein signature 285 299 - -
Seca7g04964 1389 PRINTS Disease resistance protein signature 377 391 - -
Seca7g04964 1389 SUPERFAMILY L domain-like 482 873 - -
Seca7g04964 1389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 436 IPR027417 -
Seca7g04964 1389 SMART till_3 9 149 IPR000157 GO:0007165
Seca7g04964 1389 Gene3D Ribonuclease Inhibitor 750 907 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04964 Seca-Chr7 144695063 144700980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04964 5 843 WRKY Transcription Factor Family AT4G12020 33.333 3.95e-120 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04964 - - tpra:123891409 1822.36