Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04961 ATGGCAAAGAGGAAGAGTTGGTTTGGATGGGTGAAAAGACTATTCATTTCTGAGTCAAAGGACAAAAAGTCAAAGAAATGGGGATGGAGTTTTGGAAGGATTAAACAGAAGCAATACCCCACAATTACAGCTCCAAACAGGACATTGATAGAAGCAAGTGCAGAGCAGAGAAAGCATGCTTTGACTGTGGCTATTGCAACAGCAGCTGCTGCAGAGGCTGCAGTTGCTGCTGCACATGCTGCTGCTGAGGTTGTCAAGATCACAGGTGCTTCTCGTTCTTATTCATATCTTTCCAAAGGAGACAGAAGTTTGGCTGCTATCAAGATTCAAAGTGCATACCGTGCACATCTTGCTAGGAAAGCATTAAGGGCATTGAAAGGAGTTATAAGACTACAAGCCATAATTCGTGGTCAAGCTGTGAGACGTCAATTTTCCAGCACTTTGAGGAATTTTCCCTCCAATGCAAGAAATCAGGTGGAAATTCAGGAAAGAAGCAGCTATACTCAGGAAGAAAATTACAAAAATGACCTTATCAGACACTTTCCAAAGCAAAAGAAAAAGTTAGAAGAGAATGAACTAAAGGAATTTTTGCAGCCTGAATGCCATAGTCAAAGAACTTGGGATTGTAGCTCACACTCAAGAGAGGATATTGAAGCCATATGGTCAAGAAAGCAAGAGGCAATTGTCAAAAGAGAGCGCATGAGGCAATACTCTTCTTCACAAAGGGAGAGAAAATTTCCTCAAATGGTGGAAGAATCTGTGCAAAAGGATTATGGAAGAGATAGCTGCCGTACGCTAGGAGAGTGGCTACATAAAGAAACATGTGATTGGAATGTGCTTTATAAACCTTCAAAGATGACAATAAAAACAGAATTGCAAGAAGGACTAAGTCCACAAATTTCCTTCCCAAGGAAATCATTTTCTCATATAAAAAGAAGTTCAGTTGGGGATGAGAGTTCCATGCCAAATTCTCCTGTTTTTCCTAAATACATGGCTGTGACTGAATCCAGCAAAGCAAAGGTGAGGTCTATGAGCACTCCAAGACAAAGAACAGGATATCTTGATGTTTGTTCCAATCAGAATGAGCCTCACAAGGAGGGCATTTCCTTTTCCTCTTCTTATTATGGTGCAACTACCAGCAGTAGCACCATTGAAAACAGTGCAAGCTACCAGCAGAGATGCCAAAACACAAATATCCATTATTATCCTTAG 1212 0.4084 MAKRKSWFGWVKRLFISESKDKKSKKWGWSFGRIKQKQYPTITAPNRTLIEASAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKITGASRSYSYLSKGDRSLAAIKIQSAYRAHLARKALRALKGVIRLQAIIRGQAVRRQFSSTLRNFPSNARNQVEIQERSSYTQEENYKNDLIRHFPKQKKKLEENELKEFLQPECHSQRTWDCSSHSREDIEAIWSRKQEAIVKRERMRQYSSSQRERKFPQMVEESVQKDYGRDSCRTLGEWLHKETCDWNVLYKPSKMTIKTELQEGLSPQISFPRKSFSHIKRSSVGDESSMPNSPVFPKYMAVTESSKAKVRSMSTPRQRTGYLDVCSNQNEPHKEGISFSSSYYGATTSSSTIENSASYQQRCQNTNIHYYP. 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04961 403 Pfam IQ calmodulin-binding motif 105 123 IPR000048 GO:0005515
Seca7g04961 403 Pfam IQ calmodulin-binding motif 126 144 IPR000048 GO:0005515
Seca7g04961 403 PANTHER IQ-DOMAIN 5-RELATED 4 370 - -
Seca7g04961 403 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Seca7g04961 403 SMART iq_5 101 123 IPR000048 GO:0005515
Seca7g04961 403 SMART iq_5 124 145 IPR000048 GO:0005515
Seca7g04961 403 Pfam Protein of unknown function (DUF4005) 316 388 IPR025064 -
Seca7g04961 403 Gene3D - 101 150 - -
Seca7g04961 403 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04961 Seca-Chr7 144673627 144677117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04961 1 394 IQD Protein Family AT5G03960 43.810 7.69e-79 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04961 - - gmx:100800767 517.309