Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04932 ATGGTGAAGAAAAGAATGTTAAGTCAAAACAAGAGGATGGTGTTAGTTTTGCTATACAATTGGCAAGTTCAATTGTGTTGCCAATGGCTTTGCAACATTATTGCCAAATTTGGGGAAGGTGCCAAGCTCTCAGCAAAGGATATTGCAGTTCATATTGGTACCAATAACCCAGAAGCACCCATGATTCTAGATCGTCTTCTTAGGTTCTTGGCTAGTTATTCAGTGCTGCAATGTTGTATCCTTGAAGATACACAGAGGCTTGGGGCTACTCAGTGTTTTTATAGTCTAACCTCTGGATCCAAATATTTTGTGAATGATGTTGATGGAGTGTCACTTGGCCCCTTCTTGGCTTTACTTACGGACAAGGTTTTCTGCAAAACCTGGGTTGAACTAAAAGGAGTAATCCAAGAAGGAGGTACACCATTCAATAAGGCTTATGGTATGCATTTCTTTGGGTATACAAGGTTAGATCCTAGGTTTAATGAGGTTTTCAACAACGGTATGCTTAGTTCCAGCACCATAATTATGAAGACGATACTTGAACTCTACAGTGGTTTTGAACATATCAATAGGCTGGTGGATGTTGGTGGTGGTCTTGGGATCAATGTTAAATTGATCACTTCCAAATACCCTCACATAGAGGGTGTTAATTTTGACTTGCCTCATGTCATAAAATACGCCCCCATTTATACCGGTATGAAATGGATACTTTATGATTGGAATGATGAGTGTTGCATAAAGCTCTTGGAGAATTGCTACAAGGCTATTCCTGATGATGGAAATGTTATTGTTGTTGACACAATTCTTCCCATTGTGCCTGGGACAACATCTACTGACAAGGTTGTCTCTACAAGTGATCTCTTTATGTTGACTCTAACCACAGGAGGGAGAGAACGAACGCAACAAGAATTCATGGCATTGGCAATAAGGTCTGGATTTTGCGGCATCAAAGTCGTATGTTGCGTTGCTAGCTTTTGTGTTATGGAGTTCTTCAAGTAG 999 0.4024 MVKKRMLSQNKRMVLVLLYNWQVQLCCQWLCNIIAKFGEGAKLSAKDIAVHIGTNNPEAPMILDRLLRFLASYSVLQCCILEDTQRLGATQCFYSLTSGSKYFVNDVDGVSLGPFLALLTDKVFCKTWVELKGVIQEGGTPFNKAYGMHFFGYTRLDPRFNEVFNNGMLSSSTIIMKTILELYSGFEHINRLVDVGGGLGINVKLITSKYPHIEGVNFDLPHVIKYAPIYTGMKWILYDWNDECCIKLLENCYKAIPDDGNVIVVDTILPIVPGTTSTDKVVSTSDLFMLTLTTGGRERTQQEFMALAIRSGFCGIKVVCCVASFCVMEFFK. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04932 332 Gene3D Vaccinia Virus protein VP39 233 322 IPR029063 -
Seca7g04932 332 PIRSF O-mtase 10 332 IPR016461 GO:0008168
Seca7g04932 332 Gene3D Vaccinia Virus protein VP39 104 231 IPR029063 -
Seca7g04932 332 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 13 332 IPR016461 GO:0008168
Seca7g04932 332 Pfam O-methyltransferase domain 128 230 IPR001077 GO:0008171
Seca7g04932 332 Pfam O-methyltransferase domain 233 313 IPR001077 GO:0008171
Seca7g04932 332 SUPERFAMILY "Winged helix" DNA-binding domain 30 106 IPR036390 -
Seca7g04932 332 PANTHER O-METHYLTRANSFERASE 30 315 IPR016461 GO:0008168
Seca7g04932 332 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 330 IPR029063 -
Seca7g04932 332 Gene3D - 12 103 IPR036388 -
Seca7g04932 332 Pfam Dimerisation domain 31 71 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04932 Seca-Chr7 144217963 144220945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04932 30 332 Monolignol Biosynthesis Gene Families AT5G54160 46.914 2.80e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04932 K13066 - gmx:100789402 368.237