Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04898 ATGGCAGTTACTACAGTTGATTCCGGTAGCAAGGCTTTAGAGTTTCTAGGCTTGCGTGGGAATGATCAAAGTAACCCAAATACACCATCTGTTTCTCCCAACAATCATCAGGAAGTGGAGGTGAACCTTGTAATAACAGACTACTGTATGCCAGGCATGACAGGCTATGATTTACTCAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATTCCAGTGGTGATTATGTCATCTGAAAATGTGCCTTCAAGGATTAACAGATGCTTGGAGGAAGGTGCAGAGGAGTTTTTCTTGAAGCCAGTAAGGCTGTCAGATTTGAATAGGCTTAAACCCCATATGATGAAGGCCAAGTTGAAAGAACAAAAACAAGAAACCCAAGAAAAGCATGAAAACACAGAAGCTCAACAGCAACAGCAACAACAAATACAAAATGAACAGCAACCAGCACCACCACAATCACAATACCAACAACCACACTTTCAGCCAACAGAAGAACAACAGCAACAATCACTACAACAGGCCATCAATAGTAAGAGGAAGACAATGGAACATGGGATTTCCCCTGAAACTGACAGAACAAGACCAAGGTACAGTGGCATACCCACTGCAGTGGATGAATCATTGCCAAATAATTTTCTTGAATTCCAAAATGTAATTCCAATATAA 666 0.4054 MAVTTVDSGSKALEFLGLRGNDQSNPNTPSVSPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLNRLKPHMMKAKLKEQKQETQEKHENTEAQQQQQQQIQNEQQPAPPQSQYQQPHFQPTEEQQQQSLQQAINSKRKTMEHGISPETDRTRPRYSGIPTAVDESLPNNFLEFQNVIPI. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04898 221 MobiDBLite consensus disorder prediction 116 205 - -
Seca7g04898 221 MobiDBLite consensus disorder prediction 116 131 - -
Seca7g04898 221 ProSiteProfiles Response regulatory domain profile. 1 114 IPR001789 GO:0000160
Seca7g04898 221 MobiDBLite consensus disorder prediction 132 180 - -
Seca7g04898 221 Pfam Response regulator receiver domain 36 106 IPR001789 GO:0000160
Seca7g04898 221 Gene3D - 1 196 - -
Seca7g04898 221 CDD REC_typeA_ARR 3 109 - -
Seca7g04898 221 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 167 IPR045279 GO:0009736
Seca7g04898 221 SUPERFAMILY CheY-like 4 128 IPR011006 -
Seca7g04898 221 Coils Coil 115 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04898 Seca-Chr7 143663302 143665586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04898 3 204 Response Regulator Gene Family AT3G57040 62.621 8.19e-81 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca7g04898 Response_reg 5.7e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04898 K14492 - gmx:100814494 260.381