LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca7g04893	ATGTCTTCATTTTCCATTAGTTTGATAAGAGCGTCATTTAAATCCCTGGTTATGCACCAATCAAGCCTCCAGCTCACTCCATCCTTGTTTGGAGTACCCTCGTTTTTTGAAGTGCTGAAATTTAAGGGAGGGATCACTATAATTCCACAACAGAGTGCATTTCCTCTGCAGACTGTGCAAACACTATTCAACTTTACTTTGAATTTCCCTATTTATCAAATCCAATCAAATTTTAATGACCTAACAAGTCAGCTAAAGTCTGGATTACATTTGGCACCCTATGAGAACCTGTATGTCATCTTATCAAATTCTGAAGGTTCTACAGTTGCTGCTCCTACTATTGTTCAATCGTCTGTCCTACCAGCAGTTGGGATTACACCATCAAAGGAGAGGCTAAAGCAACTGGCACAAACCATCATGGGACGTCATTCATGGAACCTTGGGTTGAACAACACTAAATTTGGCAGGGTTAAGCAGGTTCGACTTTCATCCATCTTGCAACACTCCCTTCATGGAAGTGGTGCTAGTGGCCCTGCTCGGTCACCTTCCCCTGCCCCTCTGCCTCATCCACACCATCATCACCATCATCATCGGCACCATAATCATCACGGCGATGCCCATAAATATCCTGCAACTTCACCTGCACCTGCTCCTGCAATTGGGGAAGGTGCACCTCCACCTAAGGTTGGTTCTCCTAATGCTGCAAGAAGTATGCCTGCACCAGGGCGAAGGTCTTCTGCTCAGCCTCCTAATTGTCGATTTGGGTATAGAAAGAGGTCTACCCAAAATGCTCACAAACATGTGCATCTAACACCTGCAGTTGCCCCTACTATTGCTCCACACTCTCCTATTTCCTTGCCAAAACCAAGGGTTGGAGCCCCAGCACATATCTCTCATTCAGTTCCTGCTTTGAGTCCTATACCAAATGTAGCTTTTGCGCATAATGAGCCCCCTCCTAAGAATGAACAATCACCTGAACGTTCTAAAACACTTTTTCATGGGCCATCACCATCTTCATCTTCTGCAGGTTGTCTTGGGGCTATTATTTGGACATCTTTAATGTTTGTATTACTTGCATTACATGTATAA	1089	0.4435	MSSFSISLIRASFKSLVMHQSSLQLTPSLFGVPSFFEVLKFKGGITIIPQQSAFPLQTVQTLFNFTLNFPIYQIQSNFNDLTSQLKSGLHLAPYENLYVILSNSEGSTVAAPTIVQSSVLPAVGITPSKERLKQLAQTIMGRHSWNLGLNNTKFGRVKQVRLSSILQHSLHGSGASGPARSPSPAPLPHPHHHHHHHRHHNHHGDAHKYPATSPAPAPAIGEGAPPPKVGSPNAARSMPAPGRRSSAQPPNCRFGYRKRSTQNAHKHVHLTPAVAPTIAPHSPISLPKPRVGAPAHISHSVPALSPIPNVAFAHNEPPPKNEQSPERSKTLFHGPSPSSSSAGCLGAIIWTSLMFVLLALHV.	363

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca7g04893	362	PANTHER	F20B24.21	1	355	-	-
	Seca7g04893	362	MobiDBLite	consensus disorder prediction	168	265	-	-
	Seca7g04893	362	MobiDBLite	consensus disorder prediction	308	341	-	-
	Seca7g04893	362	MobiDBLite	consensus disorder prediction	187	205	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca7g04893	Seca-Chr7	143549195	143554601	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca7g04893	4	359	C3H Transcription Factor Family	AT3G10810	47.059	6.94e-67	217

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca7g04893	-		-	gmx:100818532	462.996