Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04879 ATGGAACAAACTGAAACTAACAATATTGTTGTGGTTGATCCCAAAAATTCTAAATCCCCCAATAAAGATAATTTGGATTCTCATCAGATTCCTGAAGGTTACAAAAGAATAAGTGAATTAACAGATGAGGATATCAGAGGGCCTGAGTTTGATACAGAAGAGGATGCATATGATTTCTACTATGAGTATGCTAAATTCATAGGATTTTCTGTTAGGAAAGGTGATGTCTATAGAAATTGTAATGGTTCAATTACAATGAGGCAATTGGTTTGTAATAGAGAGGGAGAGAGAAGTGAGAAGCATCTTAATAGGACTGATAGAATTAGGGAGGCAAAGGCCTTGACCCGAACTAAGTGTAATGTAAGGCTCCGTATTTCCTTAGATTATAGAAGTAGAAAGTGGAGGGTTGGAATCTTTGAGCCAACTCACAACCATGAATTGACTCTTGCAAGTATGATACATTTGCTACTTGCTTATCGTGGGTTGAGTGTAGCTGATAAGGCACAGGTTGACGGCCTACATCATTATGGTGTTAGGACTTGTCATATAATGGATCTTATAATGGGTCAAAAGGTAGGCTATTCTAATCTTGGTTTTTGTAAGAAGAATTTGTACAATCATATTGATAAAGAGAATCGGGCAAAAATAGAGTATGGGGATGCTTTTGCTGCGTTGTGTTACTTCAATCAAAGTTTGACAACAATCCAATGA 711 0.3671 MEQTETNNIVVVDPKNSKSPNKDNLDSHQIPEGYKRISELTDEDIRGPEFDTEEDAYDFYYEYAKFIGFSVRKGDVYRNCNGSITMRQLVCNREGERSEKHLNRTDRIREAKALTRTKCNVRLRISLDYRSRKWRVGIFEPTHNHELTLASMIHLLLAYRGLSVADKAQVDGLHHYGVRTCHIMDLIMGQKVGYSNLGFCKKNLYNHIDKENRAKIEYGDAFAALCYFNQSLTTIQ. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04879 236 MobiDBLite consensus disorder prediction 1 26 - -
Seca7g04879 236 MobiDBLite consensus disorder prediction 1 31 - -
Seca7g04879 236 PANTHER OS01G0519700 PROTEIN 43 231 - -
Seca7g04879 236 Pfam FAR1 DNA-binding domain 58 148 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04879 Seca-Chr7 143329232 143329942 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g04879 FAR1 1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04879 - - ccaj:109792835 205.297