Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04870 ATGGTGTTTCTGCAGAGGTGGCTGGCTAAGTTCCCACAGTACAAGAATAATGAATTTTACATAATGGGGGAAAGTTATGCAGGACACTATGTACCACAACTTGCAGAACTCATTGTAAAGAGTAAAGTGAACATCAATCTAAAGGGGATAGCGTTAGGGAATCCCCTTTTGGAGTATGAAACTGATTTCAACTCAGTTGATGAATTCTATTGGTCACATGGCATGATATCTGATTATGTTTATGAGCTTCGGTCTTCAGTTTGTAACAATTCTAAATCTTCTAGACAAAGCCTAAGAGGCTGTTTCTCTCCAGAATGTATTTCTGTAATTATTCAGATCGATGATGAATACTCTGAGTTAGATTACATTGATCTATATTATGTCATTGGTGATAAATGCCTTTCTTACAATTTATCACAAGCTGCAATTCTCACTCACCGGAGAAGGTCAAGCATATCACAAATATTTAGGACTTTAAATATGCAAAAAGATGGAAAAACTCACCAATACCACCAGGAGCTTGATAACTGTCCACTGAAAAATGCAGAGATGTACTTGAACAGAAAAGAGGTGCAGAAGGCTTTGCATGCTCGGCTTGTTGGAGTGAACAATTATCATTTATGTAGCCCGGTAGTATCTGATAAATATAGGAGAGAAGATGAAGAAATACCAACAATCAACATTGTGGGCTGGCTCATAAAGTCTGGCCTTAAAGTAATTGTATACAGTGGGGATCAAGATTCTGTTGTTCCATTTATTGGTACTAGAAGATTGGTTGATAAACTAGCTAAGAGACTAGGATTGAAAACAACTGTGCCATACAGTGCTTGGTTTGTTGGAAAACAGGTTGGTGGATGGACACAAGTTTATGGAGATCATGATCTTACCTATGCAACTATTAGAGGGGCTTCACACAGCACCCCAACTACTCAACCAAAGAGATCGTTTGTATTGTTTGATTCATTTCTTCGTGGGAAACGACTCCCTAAAGCATGA 996 0.3825 MVFLQRWLAKFPQYKNNEFYIMGESYAGHYVPQLAELIVKSKVNINLKGIALGNPLLEYETDFNSVDEFYWSHGMISDYVYELRSSVCNNSKSSRQSLRGCFSPECISVIIQIDDEYSELDYIDLYYVIGDKCLSYNLSQAAILTHRRRSSISQIFRTLNMQKDGKTHQYHQELDNCPLKNAEMYLNRKEVQKALHARLVGVNNYHLCSPVVSDKYRREDEEIPTINIVGWLIKSGLKVIVYSGDQDSVVPFIGTRRLVDKLAKRLGLKTTVPYSAWFVGKQVGGWTQVYGDHDLTYATIRGASHSTPTTQPKRSFVLFDSFLRGKRLPKA. 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04870 331 Gene3D alpha/beta hydrolase 1 330 IPR029058 -
Seca7g04870 331 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 312 IPR001563 GO:0004185|GO:0006508
Seca7g04870 331 Pfam Serine carboxypeptidase 1 325 IPR001563 GO:0004185|GO:0006508
Seca7g04870 331 FunFam Carboxypeptidase 225 325 - -
Seca7g04870 331 PRINTS Carboxypeptidase C serine protease (S10) family signature 295 308 IPR001563 GO:0004185|GO:0006508
Seca7g04870 331 PRINTS Carboxypeptidase C serine protease (S10) family signature 7 32 IPR001563 GO:0004185|GO:0006508
Seca7g04870 331 SUPERFAMILY alpha/beta-Hydrolases 2 328 IPR029058 -
Seca7g04870 331 ProSitePatterns Serine carboxypeptidases, serine active site. 21 28 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04870 Seca-Chr7 143232466 143236567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04870 173 328 Calmodulin-binding Proteins AT2G22960 26.923 8.02e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04870 K16297 - gmx:100819443 437.573