Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04869 ATGGCATCCAGCTCAATGTCATCTTCTGGATCATGGAGTGTTAAGGACAATAAAGCCTTTGAAAGGGCTCTAGCTGTTTATGACAAGGACACCCCTGACCGTTGGTACAATGTTGCAAGGGCTGTTGGAGGGAAAACTCCAGAGGAAGTGAAGAGGCACTATGATCTCCTTGTCCAGGACATTAGGCACATTGAGTCAGGGCAAGTGCCATTCCCAAATTACAAGAAAAGTGAAGGTTATGATGAGGAGAAAAGGTAG 258 0.4574 MASSSMSSSGSWSVKDNKAFERALAVYDKDTPDRWYNVARAVGGKTPEEVKRHYDLLVQDIRHIESGQVPFPNYKKSEGYDEEKR. 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04869 85 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Seca7g04869 85 SMART sant 8 60 IPR001005 -
Seca7g04869 85 FunFam Transcription factor SRM1 4 71 - -
Seca7g04869 85 ProSiteProfiles SANT domain profile. 7 54 IPR017884 -
Seca7g04869 85 SUPERFAMILY Homeodomain-like 4 61 IPR009057 -
Seca7g04869 85 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 79 IPR044636 GO:0003700
Seca7g04869 85 CDD SANT 18 54 IPR001005 -
Seca7g04869 85 Gene3D - 2 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04869 Seca-Chr7 143199137 143199394 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca7g04869 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04869 - - gmx:778061 147.517