Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04861 ATGTTAGCATTATCCCCTTCTCCTATGTTCTCAACCATTGGATATTGGCCCTTTGAGGAGCCTATAAGCCAAAGCCAGAACAACTACTTCTACAAAGACACTGAGGACTCATTAGAACAATTTCATCATCTGTTGTCTTCATCTCATCAAACACAGGTTGAGATCCAGAATTCCACTCCCTCACCGGCCATAAGCAGTGAGCTTAGCATGGTGAAGAAGCTTATTCACAATGCTAGTGAACGTGATCGAAGAAAGAAGATCAATGCTCTAAGAAGCATTCCAGCAACAATTTCACGAGTCCTAAAGTACATACCTGAGTTACAGAAGCAGGTGGAAGGACTAACTAAGAAAAAGGAAGAGATCTTATTGAGAATTTCTAAGCAAGGGGATGCAGTCATCAGCAAAGAATCTCAAAGGAAGATTGTCCATTCCAAATCCAACTCTGGTTTTGTGGTTTCAACAAGTAGACTCAGTGATAGTGAGGCTTCTATTCAGATTTCATCTTATACTCTCCACAAGATTCCACTTTCTGAGATCTTACTGTGCTTGGAAAATGATGGCTTTGTACTGCTAAATTCTTCTTCCTCTGAGACATTTGGAGGGAGGACCTTCTATAACTTGCATTTCCAGGTGGATAAAACACAGAGGTTAGAATCCGAGGTTCTGTATGAGAAGCTTTTGTCAATAATTGATAAAAAAGGGAACTTTCTAGTGAAATGA 720 0.4 MLALSPSPMFSTIGYWPFEEPISQSQNNYFYKDTEDSLEQFHHLLSSSHQTQVEIQNSTPSPAISSELSMVKKLIHNASERDRRKKINALRSIPATISRVLKYIPELQKQVEGLTKKKEEILLRISKQGDAVISKESQRKIVHSKSNSGFVVSTSRLSDSEASIQISSYTLHKIPLSEILLCLENDGFVLLNSSSSETFGGRTFYNLHFQVDKTQRLESEVLYEKLLSIIDKKGNFLVK. 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04861 239 Coils Coil 104 124 - -
Seca7g04861 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 120 IPR036638 GO:0046983
Seca7g04861 239 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 62 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04861 Seca-Chr7 142945981 142947766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04861 1 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 38.846 2.11e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04861 - - vvi:100262373 238.81