Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g04858 | ATGGCCTTCACTCCGACCTCACATTGCTCCGCTCCTCTCTTGTTCTTCATTCCGTGGCAAAGTTCCTTTCCTTGCGATATTGAAATTTGTTCGACCAACACTGCACAATTTACAGTAATAGAAGCAGCTGGAAACGTCAAGATTCAGGAAACAAGGAAAGCCATGGGAGAGAAAGACCCAATTGCACCAGGCACAACCAGGGGAGAAACACCAAGGCTTAGAGTCATTGACCAAGCACTGAGACAGAATATAGTTCATGGAGACATAAAACCTGATAATCTGTTAATTACTCCTCATGGCACAGTAATGATAGGGGATTTCAGTGTCAGCCAAGCTGTTGAGGAAAAGGAAGCATCTGTGGTAGATGGAAATGGGACTAAAACAGGACATGCAATTGTCACCACCACTGTTGGTAAAATGGCCATCCAAAGCAGACAATAA | 441 | 0.4422 | MAFTPTSHCSAPLLFFIPWQSSFPCDIEICSTNTAQFTVIEAAGNVKIQETRKAMGEKDPIAPGTTRGETPRLRVIDQALRQNIVHGDIKPDNLLITPHGTVMIGDFSVSQAVEEKEASVVDGNGTKTGHAIVTTTVGKMAIQSRQ. | 147 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g04858 | 146 | SUPERFAMILY | Protein kinase-like (PK-like) | 76 | 119 | IPR011009 | - | |
Seca7g04858 | 146 | Gene3D | Transferase(Phosphotransferase) domain 1 | 61 | 143 | - | - | |
Seca7g04858 | 146 | Pfam | Protein kinase domain | 81 | 120 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g04858 | 146 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 84 | 96 | IPR008271 | GO:0004672|GO:0006468 | |
Seca7g04858 | 146 | ProSiteProfiles | Protein kinase domain profile. | 1 | 146 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g04858 | Seca-Chr7 | 142880677 | 142883611 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g04858 | 76 | 122 | AGC Kinase Gene Family | AT1G30640 | 44.231 | 3.37e-07 | 46.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CAMKL-LKB | Seca7g04858 | Pkinase | 8.1e-08 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g04858 | - | - | cmo:103482774 | 70.8626 |