Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04858 ATGGCCTTCACTCCGACCTCACATTGCTCCGCTCCTCTCTTGTTCTTCATTCCGTGGCAAAGTTCCTTTCCTTGCGATATTGAAATTTGTTCGACCAACACTGCACAATTTACAGTAATAGAAGCAGCTGGAAACGTCAAGATTCAGGAAACAAGGAAAGCCATGGGAGAGAAAGACCCAATTGCACCAGGCACAACCAGGGGAGAAACACCAAGGCTTAGAGTCATTGACCAAGCACTGAGACAGAATATAGTTCATGGAGACATAAAACCTGATAATCTGTTAATTACTCCTCATGGCACAGTAATGATAGGGGATTTCAGTGTCAGCCAAGCTGTTGAGGAAAAGGAAGCATCTGTGGTAGATGGAAATGGGACTAAAACAGGACATGCAATTGTCACCACCACTGTTGGTAAAATGGCCATCCAAAGCAGACAATAA 441 0.4422 MAFTPTSHCSAPLLFFIPWQSSFPCDIEICSTNTAQFTVIEAAGNVKIQETRKAMGEKDPIAPGTTRGETPRLRVIDQALRQNIVHGDIKPDNLLITPHGTVMIGDFSVSQAVEEKEASVVDGNGTKTGHAIVTTTVGKMAIQSRQ. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04858 146 SUPERFAMILY Protein kinase-like (PK-like) 76 119 IPR011009 -
Seca7g04858 146 Gene3D Transferase(Phosphotransferase) domain 1 61 143 - -
Seca7g04858 146 Pfam Protein kinase domain 81 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04858 146 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
Seca7g04858 146 ProSiteProfiles Protein kinase domain profile. 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04858 Seca-Chr7 142880677 142883611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04858 76 122 AGC Kinase Gene Family AT1G30640 44.231 3.37e-07 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Seca7g04858 Pkinase 8.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04858 - - cmo:103482774 70.8626