Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04851 ATGGCTGGAGTTGGTCTTCTATCTACACCTTATACAGTGAAACAAGCTGGGTGGGTGAGCATGGTGCTGATGTTACTTTTTGCAGTCATTTGTTGTTATACAGCCACCCTTATGAGATATTGCTTTGAAAGCAAAGAAGGAATCAGTAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTTTTGTATCAATCATTTTGTACACTGAATTATATACATATTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTGGTCTGTTTCCTGGAACTTCCTTAGATTTGGGAAGTTTCCAGTTAGATTCCATGCACTTGTTTGGAGTTTTGGCTGCACTTATTATTCTCCCTACTGTTTGGTTGAAGAATCTTCGAATAATCTCTTTCCTATCAGCTGGAGGGATTGGTGCAACACTATTGATTATTATCTGTGTGTTTTGTGTTGGGACAAATGTTGGATTCCATCACACTGGTCAATTTGTGAATTGGAGTGGCATTCCATTTGCTATTGGGATCTATGGCTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATATACCAGTCTATGGCTGACAAAAAACAATTTACTAAAGCATTAATAATATGTTTTGGTTTGTGTATTTTGATATATGGAAGCGTTGCAATCATAGGATTTCTCACGTTTGGTGATAGCACTTTGTCTCAGATAACATTGAATATGCCAGCAGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTAATTAACCCATTAACTAAATATGCTTTGCTGATGAATCCACTGGCAAGGAGTGTGGAGGAATTGCTGCCTGATAGAATTTCAAGTAGTTATTGGTGTTTTATTCTTCTTAGAACAGCACTGGTTGCATCTACAGTTTGTGCTGCTTTTCTGATTCCTTTTTTTGGGCTTGTGATGGCTTTAATTGGTTCTCTCTTCAGTATGCTTGTGTCAGTGATAATGCCAAGTTTATGTTTTCTGAAAATTGTGGGGAGAAAGGCTACAAAAACACAGGTTGCACTGAGCGTCGTAATTGCTGCATTGGGAATCATTTGTGGACTCATTGGAACATATCACTCTTTGTTGAATATTGCAGATAGCTATTAA 1125 0.3831 MAGVGLLSTPYTVKQAGWVSMVLMLLFAVICCYTATLMRYCFESKEGISSYPDIGEAAFGRYGRIFVSIILYTELYTYCVEFITLEGDNLTGLFPGTSLDLGSFQLDSMHLFGVLAALIILPTVWLKNLRIISFLSAGGIGATLLIIICVFCVGTNVGFHHTGQFVNWSGIPFAIGIYGFCFAGHSVFPNIYQSMADKKQFTKALIICFGLCILIYGSVAIIGFLTFGDSTLSQITLNMPAGAFASKVALWTTVINPLTKYALLMNPLARSVEELLPDRISSSYWCFILLRTALVASTVCAAFLIPFFGLVMALIGSLFSMLVSVIMPSLCFLKIVGRKATKTQVALSVVIAALGIICGLIGTYHSLLNIADSY. 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04851 374 PANTHER OS05G0424000 PROTEIN-RELATED 3 353 - -
Seca7g04851 374 FunFam Amino acid transporter AVT1A 1 373 - -
Seca7g04851 374 Pfam Transmembrane amino acid transporter protein 1 366 IPR013057 -
Seca7g04851 374 Gene3D Amino acid/polyamine transporter I 1 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04851 Seca-Chr7 142785762 142792410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04851 1 314 Amino Acid or Auxin Permease AAAP Family AT2G41190 74.684 1.63e-176 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04851 K15015 - gmx:100790344 645.58