Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04850 ATGGCCAGCCATAATAATAAGTATAACAGCAGCAGCAACAACAACAACAAGAAAGACCTTGAGATTTTGGTTAATGAGGATTTCTGTGAAGGTGGCAAGTACGCCAATGATCAGGGAAATCTGCCACAGTCTTTCTCATCTCAGCAATGGCCTCAAAGTTGCAAAACAATTGCTAGCCCTCCAAGTTTTGACAATCATTCAAAGTGTAACTCAGACACAGATGAAAAGACTCCTTTTCTATCAAGTCAGAAAGGTCCAGTTAATGGATGCAGCTTCACTCAAACAGCTCTCAATGGGATTAATTTGATGGCTGGAGTTGCCCTTATATGTACACCTGATACAGTGAAGCAAGCTGGGTGGGTGAGCATTCTGCTGATGCTGCTTCTTGCAGTTATTTGTTTTTATACAGGAACCCTTATGAGATACTGCCTTGAAAGCAAAGAAGGAATCAGTACCTACCCAGATATAGGAGAAGCTGCCTTTGGAAGATATGGTCGTATTTTTATATCAATCATTTTGTACTCTGAATTATATGCAATTTGTGTGGATTTCATCACCTTGGAAGCAGATAACCTCACTGGTCTGTTTCCAGGAACATCCTTAGATTTGGGTAGTTTCCAGTTGGAATCCATGCACTTGTTTGGAGTTTTGGCTGGACTTATCATTCTCCCTACTGTTTGGTTGAAGGATCTTCGAGTACTCTCTTACCTAGCAGCTGGAGGGATTGTTGCAACACTATTGATTATTATCTGTGTGTTTTGTGTTGGGACAAATGTTGGATTCCATCACACTGGTCAATTTGTGAATTGGAGTGGCATTCCATTTGCTATTGGGATCTATTGCTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATGTACCACTCTATGGCTGACAAAACACAATTTACTAAAGTATTAATACTAAGTTTTGGTGTTCCTAGTTTGATATATGGAAGCGTAGCAATCATGGGATTTCTCATGTTTGGTGATGAAACTTTATCTCAAATAACATTGAATATGCCACTAGGTCCACTTGCCTCCAGAATTGCATTGTGGGCAACAGTAATTAATCCATTAACTAAATATCCTTTAGACTAG 1101 0.3942 MASHNNKYNSSSNNNNKKDLEILVNEDFCEGGKYANDQGNLPQSFSSQQWPQSCKTIASPPSFDNHSKCNSDTDEKTPFLSSQKGPVNGCSFTQTALNGINLMAGVALICTPDTVKQAGWVSILLMLLLAVICFYTGTLMRYCLESKEGISTYPDIGEAAFGRYGRIFISIILYSELYAICVDFITLEADNLTGLFPGTSLDLGSFQLESMHLFGVLAGLIILPTVWLKDLRVLSYLAAGGIVATLLIIICVFCVGTNVGFHHTGQFVNWSGIPFAIGIYCFCFAGHSVFPNMYHSMADKTQFTKVLILSFGVPSLIYGSVAIMGFLMFGDETLSQITLNMPLGPLASRIALWATVINPLTKYPLD. 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04850 366 PANTHER OS05G0424000 PROTEIN-RELATED 95 357 - -
Seca7g04850 366 Pfam Transmembrane amino acid transporter protein 90 365 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04850 Seca-Chr7 142725424 142739094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04850 33 365 Amino Acid or Auxin Permease AAAP Family AT2G41190 54.569 4.57e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04850 K15015 - gmx:100790344 471.085