Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04847 ATGGCTGCATTGAGCGGCATTACCATGGCTACACTCGGTAACATCGCCATCTCCCGTGGACATACACCATCGGAGTCCGTCATGGTAATAACATCTGGTCTGGCTTCGAGTTATTTTGGGTTGGAGAAGGATTTGCAAAATCTATATTTCCTACAAACTAGTGTATACACAGCTCGTAGGCGCTTCTCGGCACGAGATCTGGTTTGTTATGGACGGAGAAATTTGAGTCGCTCCGGTGGTGTGGTGGCGGCGGACTGTACCGTAGAAAATTCTAAGTGGGGTAGAGGTTCTCCGTTTCGATTTGGAACGAAAGGTGATTGTCGTGGGTCGTTTTTTTTTGTTGCAGACCCTGATTGTAAAGCAACAATGGATGAAGTTGATGGACACATGTCTGACACGGAATCAACCATGTATACTGAGGACCAATCTCAGTTCACGAATGAGGAAAATGTTAGCTATGAAGAGAGTGGGGAAGAAGGAGTTCAGTTGCATGATGCTGGTGTAGGTGGTGAAGATTGTGATAGGGAGTACAGTGGTGGGGGAGATGGTAGTGGGGATAAATATAGGATCGATGGAGGGGAGGACATTAACATAATAAGGCTAAGTGAAGATGAGTTTAAATTGTATCATTTTACAAGTCGGCTAGTTGCATTTCAGTTTTATAACAAGTATGCCCAGAAAAGAGGTTTTGCAGCCCGGAGATGGAACACAGTTGTGAACAAGGAAGGTGGAGTGTCTCAACAAACTTTTGTGTGTTTTAGGGAAGGTTATAGACTGAAAAAACACTTGAATAAGGAGAATCGTAAGAGAGAGGAGAGACCACTTACTAGGTGTGGTTGTTTTGCTTTTTTGAAAGTACGGTTTGCACGAGATGTTAGTCGTTGGATTGTTAAAGATTTCTCTGATGAGCATTGTCATGAATTGTTACCTAGGAAATATGATGGAATGTTGAGCTCACATAGGAAGATGAATGAAACAGATATAATGCAAATGAATACCATGCGTGATGTTGGTATTAGTGTTACTCAAATATACGGGTTAGTGGCTAATCAATCAGGAGGGTATAAGAATGTTGGTTACAGGAAAAGTGATATGTACAACGCAATTATGAAGGAAAGAAGATCTGAAGGTAGTGATGCCAGGGCTGCATTATCCTATCTGAGAGCTTTGGGTCGCAATGATAAGGACATGTATTGGTCTCACACTGTTGATGAAGAAGGTAGGCTGAAGCATCTTTTTTGGACAGACGGTAGAAGCCAAGGTGACTACAAACTTTTTGGCGATGTGTTGGCATTTGATGCGACCTATAGACGGAACAAGTATATGTCCCTGTTGGTTGTTTTTGCCGGAGTAAATCATCATAATCAAACCATTGTCTTTGGTAGTGCACTTGTTGGTAACGAAACAGAAGAGACATATGTGTGGTTGCTGAAAGAATTTTTACGTGCAATGAAAGGGAAGAATCCAGTATCTGTTATAACATATGGTGACATTGCAATGAGGAATGCCATCAAGCAGGTTATCCCTGCTACCCGTCATAGGTTGTGTGCGTGGCATCTGTTGAGGAATGCAACTAGCAACATAAGCAACCCAAGGTTCACGGCAAAATTCAAAAGGTGTATGCTAGGTGACTATGAGGTTGGGAGATTTAGAACCAAATGGGAGGAGATGATATGTGAGTTTGGCCTTGAGAGCAATGAATGGGTTAGAGAGTTGTATGAGAAAAGAAAATTGTGGGCAACTGCTCACATCCGTGGAAGTTTTTTTGCTGGTTTTAGGATCACCTCTAGGTGTGAGGGTCTTCACTCTCAAGTAGGGAGGTATGTACATTACAGAAATAATATGAGAGAGTTTCTGAGGCACTTTTGCCAATACTTGGGTTATACTAGGCAGAAGGAGTTGGAGGCAGACTTTGAGTCAATAAATGGAGATCCTGTTCTACAAACACCTTTTGTAGATATTGAAGCAGCCGCTGCAAAGCTGTATACAAGGAAGGTTTTTATGAAGTTCAGAGTCATGCTTTGGAGGGCAAGTAAGATGAAGGTTAGTGGATGTGAGCGGACCCCAAGCTGTCACATTTACATTGTCAGTTACAGATCAGGCCCGGCTAGAGAGTGGCATGTGTCATATGTGGCTGAGAATGAGGAAGTGAAGTGTTGCTGTCAGCGGATGGAGTCAATGGGTATCCCGTGTGAGCATATTGTTGTCCTCTTACATTACCTTGATGTAAAGGAATTGCCGAAATCGTTGATTTTGGATAGGTGGACAAAATATGCCAAACAAAGTGTGGATGGAATTGATGTGGGCTATACCAATAGTAGGGGCTCTATTTGGAAGAGTGAAGTTATGTCATTGTTGTTTGATTGCTATGAGTTGTGCAGGCTAGCTGGTAAACGGATTGATAAATTGGAGGAGACCAAAGGAGTAATTAGGAATCATATGCAGTCTTTGAAAGAGAGTAATGAAGATGGGAACAGCGAGGATTTTAATTATGGGGCAGGACGTGACAATAATTTGAGGGACCCTGCACGTGTGAGAACGAAAGGTTGTGGGTCGAGGCAGTCAGCAAGGGGCAGTAGGGGCAACAGGAGGACCACAACATGTAGTGTATGCCAGGGTCGGGGGCATAACAAACAGACCTGTCGTCTACGAGCAAGGGAAACACCTTCAGAAACAATTGCAACAACAGGAAGCCGAGATGAGAGGAACGAGTGA 2715 0.4324 MAALSGITMATLGNIAISRGHTPSESVMVITSGLASSYFGLEKDLQNLYFLQTSVYTARRRFSARDLVCYGRRNLSRSGGVVAADCTVENSKWGRGSPFRFGTKGDCRGSFFFVADPDCKATMDEVDGHMSDTESTMYTEDQSQFTNEENVSYEESGEEGVQLHDAGVGGEDCDREYSGGGDGSGDKYRIDGGEDINIIRLSEDEFKLYHFTSRLVAFQFYNKYAQKRGFAARRWNTVVNKEGGVSQQTFVCFREGYRLKKHLNKENRKREERPLTRCGCFAFLKVRFARDVSRWIVKDFSDEHCHELLPRKYDGMLSSHRKMNETDIMQMNTMRDVGISVTQIYGLVANQSGGYKNVGYRKSDMYNAIMKERRSEGSDARAALSYLRALGRNDKDMYWSHTVDEEGRLKHLFWTDGRSQGDYKLFGDVLAFDATYRRNKYMSLLVVFAGVNHHNQTIVFGSALVGNETEETYVWLLKEFLRAMKGKNPVSVITYGDIAMRNAIKQVIPATRHRLCAWHLLRNATSNISNPRFTAKFKRCMLGDYEVGRFRTKWEEMICEFGLESNEWVRELYEKRKLWATAHIRGSFFAGFRITSRCEGLHSQVGRYVHYRNNMREFLRHFCQYLGYTRQKELEADFESINGDPVLQTPFVDIEAAAAKLYTRKVFMKFRVMLWRASKMKVSGCERTPSCHIYIVSYRSGPAREWHVSYVAENEEVKCCCQRMESMGIPCEHIVVLLHYLDVKELPKSLILDRWTKYAKQSVDGIDVGYTNSRGSIWKSEVMSLLFDCYELCRLAGKRIDKLEETKGVIRNHMQSLKESNEDGNSEDFNYGAGRDNNLRDPARVRTKGCGSRQSARGSRGNRRTTTCSVCQGRGHNKQTCRLRARETPSETIATTGSRDERNE. 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04847 904 MobiDBLite consensus disorder prediction 815 904 - -
Seca7g04847 904 ProSiteProfiles Zinc finger SWIM-type profile. 706 742 IPR007527 GO:0008270
Seca7g04847 904 Coils Coil 800 820 - -
Seca7g04847 904 Pfam MULE transposase domain 429 523 IPR018289 -
Seca7g04847 904 PANTHER OS01G0519700 PROTEIN 211 851 - -
Seca7g04847 904 Pfam FAR1 DNA-binding domain 219 310 IPR004330 -
Seca7g04847 904 MobiDBLite consensus disorder prediction 852 876 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04847 Seca-Chr7 142659172 142665116 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g04847 MULE 1.9e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04847 - - tpra:123913749 695.656