Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04831 ATGGGGATAGAGATTGTGGAGCCTAACACATGCATCAGGGGTTGCTGCACCAGCTCCTCTATTCCTCTTCATCTCCCTCCTTCCTCTTTTACTCTTCTCTCACCCATTGCCCGAGGGGCTGAGAGTGTTGTTTATGAAGGGACTTTGGATGGTGAGAAGGTTGCGGTGAAGAAACCCATCTTGTCAGTTTCAGAAGACATTAATAAGTTCCATAAAGAATTGCAATTGCTATGCAAGCTAGATCACCGGGGAATAGCAACACTAATTGCTGCCCATGCAAAACCACCCAATTACTTGTTTTTCTTCAAGTTATATGAATCTTCGAATCTCGCACAGAAGTTACATGTGGAAGAATGGGCCCCAACTATCAATCATGCACTTATGATAACAATGCAGTTAGCAAAGGCTTTGCAATATCTGCATAACCTCGGGATTTTACATAGAGATGTGAAACCAGCGAATATTCTTCTTGACAAAAATCTTTGTCCGCACCTCACTGATTTTGGTTTGGCTGAATACAAGAATGATATTAAGGGAGTTTCTCTTCAGAATTGGAAGTCTTCTGGAAAGCCTACTGGTGGTTTTCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGAAAGGAGTTACACACAGAAAAATCAGATGTATACAGTTTTGGGGTATCAATCAATGAACTTCTTACTGGTGTTGTGCCATATACTGATCTTCGTGCAGAAGCACAGGCTCACACAGTGCTTGAGATGAACTATACTGAGCAGCAACTAACAGCGGCTGTTGTTTCTGATGGATTACGGCCAGTCCTTGCCAGTGAGGAATTGGGTATACCCTCAAGATTATTATCAATGATACAGAAGTGCTGGGATGCAAATCCTAAAAGCAGACCTTCCTTTGATGATATTGTCAAGGAACTTGATTTTATTATGGAACAGAGGAAGATAAAGATGGTAGAAGACGTGCAAATAAGACCTTGTAACTTGCATGTGGATCAACTTGTGGACAAGACTTACCTTCAGGCTTATCAAGAAAGTATTAGTTGGTCCACTCAAGGTGAACTTTTGGCCAGGAATGCCTCTAGTGCAACTGATTCTGGTTTGAGAACATGGTCTGAGTCTTATGATGAGCCTTTGGCTTACCATCCCATGCTGTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACTATGGAGGACACACATTTCCTTCTGCCCCATATTTGCAATGAAAAGGATGTCTATGCTTTTGGTATCTTTGATGGCCACAGAGATTTCTATTCCTACCTACATGGGATATTAGTGTGTGTGTGCGTATCAAGCTTATTATGTTACCCTAGGACCTGA 1362 0.4185 MGIEIVEPNTCIRGCCTSSSIPLHLPPSSFTLLSPIARGAESVVYEGTLDGEKVAVKKPILSVSEDINKFHKELQLLCKLDHRGIATLIAAHAKPPNYLFFFKLYESSNLAQKLHVEEWAPTINHALMITMQLAKALQYLHNLGILHRDVKPANILLDKNLCPHLTDFGLAEYKNDIKGVSLQNWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGVSINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLASEELGIPSRLLSMIQKCWDANPKSRPSFDDIVKELDFIMEQRKIKMVEDVQIRPCNLHVDQLVDKTYLQAYQESISWSTQGELLARNASSATDSGLRTWSESYDEPLAYHPMLSWGSYATCGRRETMEDTHFLLPHICNEKDVYAFGIFDGHRDFYSYLHGILVCVCVSSLLCYPRT. 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04831 453 Pfam Protein kinase domain 32 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04831 453 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 314 - -
Seca7g04831 453 FunFam Protein kinase and PP2C-like domain-containing protein 20 344 - -
Seca7g04831 453 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04831 453 Gene3D - 384 436 IPR036457 -
Seca7g04831 453 SUPERFAMILY PP2C-like 382 430 IPR036457 -
Seca7g04831 453 Gene3D Transferase(Phosphotransferase) domain 1 18 340 - -
Seca7g04831 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Seca7g04831 453 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04831 453 SUPERFAMILY Protein kinase-like (PK-like) 22 335 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04831 Seca-Chr7 142515691 142523237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04831 99 446 PP2C-type Phosphatase Gene Family AT2G40860 58.427 4.37e-150 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Seca7g04831 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04831 - - gmx:100785390 748.429