Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04805 TCCTTAGCTCTCTTCCATTGTTCAAGCCACAAACAGGATGTGCTATTCTTAGATAATGAAATTTCCTTCAATGAGGCTATCATTAAGGAAAGAGAGCAGGGAATTCAAGAAATCCAGCGGCAAATTGGTGAAGTAAATGAGATTTTCAAAGATCTTGTTGTGCTTGTTCATGAGCAAGGAGCAATGATTGACTGGTTTATGTTAGTTGATGTCAAGAATTTTCATTTTATAGATGATATTGGGTCCAACATTGAGCAATCCCATGAAGCAACAATACAAGCAAAATCTCAACTTGTGAAAGCTTCAAAGACACAAAGATCAAATTCGTCTTTGGTACATATAAGTTTTCTTATTTGTGATTGGATTATTGGTTTTAAGTTTCTTCTTCCTCCCATCACATAA 402 0.3507 SLALFHCSSHKQDVLFLDNEISFNEAIIKEREQGIQEIQRQIGEVNEIFKDLVVLVHEQGAMIDWFMLVDVKNFHFIDDIGSNIEQSHEATIQAKSQLVKASKTQRSNSSLVHISFLICDWIIGFKFLLPPIT. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04805 133 Gene3D - 20 129 - -
Seca7g04805 133 PANTHER SYNTAXIN 12 116 IPR045242 -
Seca7g04805 133 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 25 64 IPR000727 -
Seca7g04805 133 CDD SNARE_Qa 28 100 - -
Seca7g04805 133 SMART tSNARE_6 20 101 IPR000727 -
Seca7g04805 133 Pfam SNARE domain 77 119 IPR000727 -
Seca7g04805 133 SUPERFAMILY SNARE fusion complex 20 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04805 Seca-Chr7 142175412 142175901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04805 9 118 SNARE and Associated Proteins AT5G46860 58.182 1.63e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04805 - - lang:109331810 160.229