Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04801 ATGGCAGCAGAAGTGACTGGAGAAGATATTGTGAGGTCAATGAGTGATGGAAGGAGGAGTTTTGGGGAGTGGTCCTCAGCAAGCTTGCATGATGCAGTTGTTGGACAGGGTGATGTGTTTCAAAGAAGTGGAAGGGAAATAGATGAAGAGGAGGAGCTGAAGTGGGAAGCTTTGGGGAGGCTTCCAACATATGATAGGTTGAGGAAAGGGATTCTGAAGCAAGTTCTAGAAAATGGGAGGGTTAACTATGAAGAGATTGACATCACCAAACTTGGAGTGCAGGAAAAGAAGTATATCCTTGAGAGCATACTGAAGACTGCTGAAGAAGATAATGAGAAATTTCTTCATAGAATGAGGGACAGAATAGATAGGGTTGGAATTGAAATTCCCAAGATTGAAGTCAGGTTTGAGCATTTATCAGTTGAAGGAGATGCATATATTGGAACCAGGGCCTTACCAACACTACTCAATACTACCCTGAATGTAGTAGAGGGACTTCTTGGATATTTCAAGCTTTTGCCATTTAAGAAAAGGGTTGTCAAGATTCTCAAAGATGTCAGTGGAATTGTGAAACCATCAAGAATGACTTTGCTTTTGGGACCTCCAGGATCAGGAAAAACAACACTCCTCCAGGCACTTGCTGGAAAAATGGACAAGGATCTAAGGGTATCAGGAAGAGTCACATACTGTGGTCATGAATTGTCAGAGTTTTTTCCCCAAAGAACATGTGCTTATATTAGTCAGCATGATCTTCACCATGGAGAAATGACAGTGAGAGAGACACTGGACTTCTCTGGACGCTGCTTGGGAGTTGGAGCAAGGTATGATCTGCTGGCAGAATTGTCAAGAAGAGAACTAGTAGCAGATATCAAACCAGATCCTGAAATTGATGCTTTCATGAAAGCCACAGCAGTGGAAGGTCAAGAAACAAGTCTTGTTACAGATTATATTCTCAAGATTCTTGGATTGGAAATATGTGCTGATATTTTGGTGGGAGATGAAATGAGAAGGGGCATATCTGGTGGACAAAAGAAGCGTTCAACTACTGGTGAGATGTTGGTAGGACCTGCAAAAGCCTTCTTCATGGATGAAATTTCAACTGGTTTGGATAGTTCCACTACCTTCCAAATCATCAAGTTTATGAGACAGATGGTCCATATCATGGATGTTACTATGATAATCTCTCTTCTGCAACCTGCACCAGAAACATATAACCTTTTTGATGACATAATATTACTTTCTGAAGGTAAGATTGTCTATCAAGGTCCCCGTGAGAGTGTTCTAGATTTTTTTGAAAGTGTAGGCTTCAAATGCCCAGAAAGGAAAGGAGTTGCAGACTTTTTACAGGAGGTAACTTCCAAAAAGGACCAAGAACAATACTGGTTCAGAAGGGACATACCTTACCAATATATTAGTGTGCCTGAGTTTGTAGCACACTTCAACAATTACTGCATTGGCCAACAACTTCATGAAGAGATTCAAGTTCCATTTGATTCTAATAAAACTCACCCTGCTGCATTGGTCAAGGAAAAGTATGGAATCTCCAAATGGGAACTCTTTAAGGCATGCTTTTCAAGAGAGTGGCTATTGATGAAGCGCAACTATTTTGTATATATATTTAAGATTTTTCAGATTATGATCACATCTATAATTACCATGACAGTATTTTTTAGAACAGAAATGAAGCATGGTCAACTTGAAGATGGAGGAAAATATTATGGTGCACTATTTTTCAGTCTCATCAATGTAATGTTCAATGGAGTGGCAGAGCTAGCAATGACTATTAATAGACTTCCTGTTTTCTTCAAGCAAAGAGATTTCCTGTTTTATCCATCATGGGCTTTTGCATTGCCCATCTGGGTCCTTAGAATTCCTCTCTCTCTATTGGAGTCAGGAATATGGATCATCCTCACCTATTATACTATTGGCTTTGCTCCTTCAGCCAGTAGGTTTTTTCGTCAATTATTGGCATTCTTCTGTGTGCATCAAATGGCTCTATCCCTTTTCCGCTTCATTGCTGCAATTGGAAGAACAAAAGTTGTGGCAAACACACTTGGTATTTTCACAATTTTAGTTGTTTTTGTCCTAAGTGGATTTACTATTTCAAAAGATGATATTGAGCCATGGATGATATGGTGCTATTATGCTTCACCTATGATGTATGGACAGACTGCAATAGCCATCAATGAGTTCCTAGACAAAAGATGGAGTGCTCCTAATAATGACCCAAGAATTCTTGAGCCCACAGTTGGGAAGGCTTTTCTTAAGGCCAGAGGCATATTTACAGAAGACTATTGGTATTGGATCTCTGTTGGTGCCCTTATAGGATTTTCTCTGCTTTTCAACATTTGTTTTATTCTTGCTCTAACTTATTTAAATCCATTTATAAGCTCCAAATCTATTATAGTGGAAGAGGAAGACAGTAGGAAAACCATGACTGCATCCTCCTCAGGGAAAAAACTGGCAACAGAAAATTCAGAGAAGAATTCAGCTTCAAATGCTAAACGGTTTGAAGGTATTGATCTGGAAGTAAGAAACACCACACATAGCCCAATTACTAAAGCTGCAGAATTTTCAAAGTCCAAGAAGGGAATGGTGTTGCCCTTTCAGCCTCTGTCACTTGCTTTTGAAAATGTGAATTATTACATCGATATGCCAAATGAAATGAAGAAACAAGGAATTGAAGAGAATAGACTCCAACTACTAAAAGATATAAGTGGTGCTTTCAGGCCTGGAGTTTTAACAGCATTAGTTGGTGTAAGTGGTGCTGGAAAAACCACCTTGATGGATGTGCTTGCAGGAAGGAAAACTGGTGGTTATATTGAGGGAAGCATCAACATATCCGGTTATCCAAAGAACCAATCAACTTTTGCTCGGATTAGTGGTTATTGTGAACAAAATGATATCCATTCTCCAAATGTTACAGTCTATGAATCTCTTCTGTTTTCTGCTTGGCTGCGTCTCAGTAAGGAGGTTGATAAAGAAACAAGAAAGATGTTTATTGAGGAAGTTATAGAGCTGGTCGAGCTACATTCAGTGAGGAATTTTATAGTAGGCCTTCCAGGAATAGATGGCTTATCAACTGAGCAAAGAAAGAGGCTTACCATCGCTGTAGAGTTGGTTGCAAATCCTTCAATTATCTTTATGGATGAGCCAACAACTGGTCTTGATGCTAGAGCTGCAGCAGTTGTTATGCGTACTGTTAGAAATACAGTAGATACAGGGAGAACTGTTGTATGCACAATTCATCAACCAAGCATTGATATATTTGAACATTTTGATGAGCTGCTTTTGATGAAGAGAGGTGGACAAGTGATATATGGTGGTCCTCTTGGTCGAAATTCTGAGAAGCTTATAGAGTACTTTGAGGCTATTACAGGAATTCCTGAGATTAAAGATGGATATAATCCAGCCACATGGATGCTGGAGATCACTTCTCCCTTAGTTGAATCTCAGCTTGATATAGACTTTGCTGAATTATACACTAAGTCAGACCTTTACCAGTACGTGGCATTCATACTCATGGCTATATTCCCAGAGATTCCTGCTTCTTTTTGCTCATATTTGTCTGAAATTTCTTATGATGTTTTACTTTTCCATACTATGATATGTCTTTTCAGAAAGAACCAGGAACTTATTAAGGAACTATGCACACCAGTACCTGGAACAAAGGATCTTTATTTTCCATCAAAATACTCCCAATCCTTTGTTACTCAATGCAAAGCTTGCTTCTGGAAACAGTACTGCTCCTATTGGAGGAATCCACAGTATAATGCTGTCAGATTATTCATCACTATAATTATTGGCATCATTTTTGGACTAATTTATTGGAATAAAGGAGAAAAGATGCAAAAGGAACAAGACCTGTTGAATCTCGTTGGAGCTATGTATTTATCTGTTATTTTCCTTGGAGCCTCCAACACTAGCAGTGTGCAACCTGTTGTTGCAATAGAAAGAACAGTTCTCTACCGTGAAAGAGCTGCTGGAATGTACTCAGAACTGCCCTATGCAATTGGTCAGGTAGCAATTGAAGTAATTTATGTTGCAATCCAAAGTCTAGCCTATTCCATTATCCTCTACTGGATGATTGGGTTGCCATCACAAGTTGATAATTTCTTATGGTTCTACTACTTCATATTCATGTCCTTCATGTACTTCACACTGTATGGAATGATGACTGTAGCTCTGACACCAAACCACCAAATTGCTGCAATTGTTATGTCTTTCTTCATCAGTTTCTGGAACCTGTTCTCTGGTTTTCTTATCCCAAGAACGCAAATTCCAATATGGTGGAGGTGGTACTATTGGGCATCCCCTGTGGCATGGACTATATATGGATTGGTGACATCACAGGTGGGTGACAAGAACAGTCCAATAGAAGTTCCTGGGTTTAAGCCAATGACAATAAAAGAGTACCTTGAGAAACGGTTGGGCTTTCAACATGACTTCCTTGGGGTTGTTGCTTTGACTCACATTGCTTTCAGCCTCCTCTTCCTTTTTGTATTTGCTTATGGCATCAGGTTCCTAAACTTCCAGAAAAGATAA 4545 0.3936 MAAEVTGEDIVRSMSDGRRSFGEWSSASLHDAVVGQGDVFQRSGREIDEEEELKWEALGRLPTYDRLRKGILKQVLENGRVNYEEIDITKLGVQEKKYILESILKTAEEDNEKFLHRMRDRIDRVGIEIPKIEVRFEHLSVEGDAYIGTRALPTLLNTTLNVVEGLLGYFKLLPFKKRVVKILKDVSGIVKPSRMTLLLGPPGSGKTTLLQALAGKMDKDLRVSGRVTYCGHELSEFFPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGARYDLLAELSRRELVADIKPDPEIDAFMKATAVEGQETSLVTDYILKILGLEICADILVGDEMRRGISGGQKKRSTTGEMLVGPAKAFFMDEISTGLDSSTTFQIIKFMRQMVHIMDVTMIISLLQPAPETYNLFDDIILLSEGKIVYQGPRESVLDFFESVGFKCPERKGVADFLQEVTSKKDQEQYWFRRDIPYQYISVPEFVAHFNNYCIGQQLHEEIQVPFDSNKTHPAALVKEKYGISKWELFKACFSREWLLMKRNYFVYIFKIFQIMITSIITMTVFFRTEMKHGQLEDGGKYYGALFFSLINVMFNGVAELAMTINRLPVFFKQRDFLFYPSWAFALPIWVLRIPLSLLESGIWIILTYYTIGFAPSASRFFRQLLAFFCVHQMALSLFRFIAAIGRTKVVANTLGIFTILVVFVLSGFTISKDDIEPWMIWCYYASPMMYGQTAIAINEFLDKRWSAPNNDPRILEPTVGKAFLKARGIFTEDYWYWISVGALIGFSLLFNICFILALTYLNPFISSKSIIVEEEDSRKTMTASSSGKKLATENSEKNSASNAKRFEGIDLEVRNTTHSPITKAAEFSKSKKGMVLPFQPLSLAFENVNYYIDMPNEMKKQGIEENRLQLLKDISGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKNQSTFARISGYCEQNDIHSPNVTVYESLLFSAWLRLSKEVDKETRKMFIEEVIELVELHSVRNFIVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEHFDELLLMKRGGQVIYGGPLGRNSEKLIEYFEAITGIPEIKDGYNPATWMLEITSPLVESQLDIDFAELYTKSDLYQYVAFILMAIFPEIPASFCSYLSEISYDVLLFHTMICLFRKNQELIKELCTPVPGTKDLYFPSKYSQSFVTQCKACFWKQYCSYWRNPQYNAVRLFITIIIGIIFGLIYWNKGEKMQKEQDLLNLVGAMYLSVIFLGASNTSSVQPVVAIERTVLYRERAAGMYSELPYAIGQVAIEVIYVAIQSLAYSIILYWMIGLPSQVDNFLWFYYFIFMSFMYFTLYGMMTVALTPNHQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDKNSPIEVPGFKPMTIKEYLEKRLGFQHDFLGVVALTHIAFSLLFLFVFAYGIRFLNFQKR. 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04801 1514 Gene3D - 883 1122 IPR027417 -
Seca7g04801 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 897 1110 IPR027417 -
Seca7g04801 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 440 IPR027417 -
Seca7g04801 1514 MobiDBLite consensus disorder prediction 813 832 - -
Seca7g04801 1514 Pfam Plant PDR ABC transporter associated 736 802 IPR013581 -
Seca7g04801 1514 FunFam ABC transporter G family member 40 888 1118 - -
Seca7g04801 1514 Pfam ABC transporter 183 365 IPR003439 GO:0005524
Seca7g04801 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 874 1126 IPR003439 GO:0005524
Seca7g04801 1514 Pfam ABC transporter 902 1053 IPR003439 GO:0005524
Seca7g04801 1514 Gene3D - 171 467 IPR027417 -
Seca7g04801 1514 Pfam ABC-2 type transporter 398 452 IPR043926 GO:0140359
Seca7g04801 1514 Pfam ABC-2 type transporter 1083 1153 IPR043926 GO:0140359
Seca7g04801 1514 MobiDBLite consensus disorder prediction 814 832 - -
Seca7g04801 1514 FunFam ABC transporter G family member 34 170 474 - -
Seca7g04801 1514 Pfam ABC-transporter N-terminal 107 157 IPR029481 -
Seca7g04801 1514 CDD ABCG_PDR_domain2 871 1109 IPR034003 -
Seca7g04801 1514 Pfam ABC-2 type transporter 519 731 IPR013525 GO:0016020|GO:0140359
Seca7g04801 1514 Pfam ABC-2 type transporter 1238 1450 IPR013525 GO:0016020|GO:0140359
Seca7g04801 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 167 440 IPR003439 GO:0005524
Seca7g04801 1514 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 34 1514 - -
Seca7g04801 1514 CDD ABCG_PDR_domain1 181 422 IPR034001 -
Seca7g04801 1514 SMART AAA_5 192 417 IPR003593 GO:0016887
Seca7g04801 1514 SMART AAA_5 911 1103 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04801 Seca-Chr7 142003217 142013032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04801 899 1086 Calmodulin-binding Proteins AT2G36910 27.228 4.11e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04801 K08711 - gmx:100788067 2530.75