Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04790 ATGAAGAAAATGATGAATTACAAAGCTCTAGTGAGGCATTGGGCAGCTTGTGAGACTATGGGATCAGTTACAACTATATGTAGTGAGATCTTGGGGACAACAACAGAGTCAGCAGTATTGGAGTTTGGGTTATCACTAGGTGGGGATTTTCAGGCAAAGAGACAAGCATGCAAACTTATTAAAGTTGAGCCATTCAACTTTGGGAAGAAAAGAATGGGTGTAGTTGTGGAGCTCCCTGAAGGAGGTTTACGAGCCCATTGTAAAGGTGCTTCTGAAATAATTCTTGCTGCTTGTGACAAGGTGATTGACTCAAAAGGTGATGTTGTCTCTCTTGATGAAGAATCAAGTAATTATCTTAAGAGCACAATCAACCAGTTTACTAGTGACACACTTAGAACTCTTTGCCTTGCCTATATGGAATTGGAAAATGGGTTCTATGATGAAGACTCTATTCCAGCTTCTGGGTACACTTGTTTAGGAATTATCTTCTTGCTATTTTCTCATCATTACTTCGTTAATTGTAGTTTCCTTTCTTTGTTTCAAGTTGGTATTGGTTGA 558 0.3889 MKKMMNYKALVRHWAACETMGSVTTICSEILGTTTESAVLEFGLSLGGDFQAKRQACKLIKVEPFNFGKKRMGVVVELPEGGLRAHCKGASEIILAACDKVIDSKGDVVSLDEESSNYLKSTINQFTSDTLRTLCLAYMELENGFYDEDSIPASGYTCLGIIFLLFSHHYFVNCSFLSLFQVGIG. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04790 185 PANTHER CATION TRANSPORTING ATPASE 1 36 - -
Seca7g04790 185 Gene3D - 1 165 IPR023299 GO:0000166
Seca7g04790 185 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 21 162 IPR023299 GO:0000166
Seca7g04790 185 Pfam Cation transport ATPase (P-type) 29 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04790 Seca-Chr7 141817348 141817905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04790 1 35 Primary Pumps ATPases AT4G37640 80.000 6.75e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04790 K01537 - gmx:100776926 221.861