Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04761 ATGAAGAACTCTGCTTCAGATCAGGGCTTTTACATTGACAGCGATGAAGAAGATGTGGAAAAGGATTTAAACAAAGACGAACAAGATGGAAATGATTCGGATTATTCCAATGACTCGAATGATAACCAGGCACAGAGAAAACCCAGTTCTTACAGCATGGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTATATGGTAGCGTGCCATCACCAAATATAGGATTTCTTGGCACTACATCACTGTCAAGATTAGGCAGTTCTTTTCTCTCTTCAACTTTCATAGGGAAGCACACTCCTGAATTTGTGCCACCAGTGAAAAAGCCTCTGTTACAGCCAACAGTTGATGAGCAACAGCGACGTAGCTCTCATACCTTGCTTCCTCGCCATCCATCTAGGAAAGCTTCCATTAGGAAGGAGGTTTCCAAGGTTTCTCATGAAGTTCATATTCCTGGCCAATGCTCTTTTGGACAAGCTGTGCTTAATGGTATAAATGCCCTTTGTGGTGTAGGAATCCTTTCAACCCCTTACGCACTTAGAGAAGGTGGATGGACTGCACTTTCTATCTTGTTAATATTTGCAGTGTTTTCCTTTTATACTGGGCTGCTCTTGCGTTATTGCTTGGATAGTGAACCTGGGCTTGAGACATACCCTGACATTGGCCAAGCTGCATTTGGTACTACTGGACGTGTTCTCATTTCAATAATATTATACATGGAACTATATGCTTGTTGCATTGAATACATAATTGTAGAGAGCGACAACTTGTCTTCATTATTTCCGTATGCACACCTAAGTTTGGGTGGAATTGAATTGAATTCACACATTCTGTTCGCAATCTTGACAACTGTGGCTCTTCTTCCTACTGTTTGGCTCCGTGACCTACGCATTCTCAGTTATATCTCAGCTTGCGGAGTTATTGCAACGATTTTAGTGGTTATATGCTTGTTCTGGGTTGGATTGTTAGACAACGTTGAGTTTCATACCAAAGGAACAACAACACTCAATCTTGCAACTTTTCCTGTTGCTGTGGGTCTCTATGGTTACTGCTATGCAGGACATGCTGTGTTCCCAAACCTCTATACAGCCATGGCAAATCGAAATCAATTCCCTGCAGTGCTCTTAACATGTTTTGTTATTTGTACAACAATGTATTGTGCTGTAGCGATTTTGGGATACGCAATGTTTGGAGAGACTACACTCTCTCAGTATACTCTTAACATGCCCCCAGCCTTAGTGGCATCCAAGATTGCTGTGTGGACTACGGTGGTTAATCCGTTTACCAAATATCCTTTATATATTTATTATGCACCAAACAGATGCCTCTGTGCTTCCCATATATGCTTAGATTCTTACATATACTGTGTGGAAAAAGTGATCCGGCATAAACAATAG 1395 0.4151 MKNSASDQGFYIDSDEEDVEKDLNKDEQDGNDSDYSNDSNDNQAQRKPSSYSMAWPQSYRQSIDLYGSVPSPNIGFLGTTSLSRLGSSFLSSTFIGKHTPEFVPPVKKPLLQPTVDEQQRRSSHTLLPRHPSRKASIRKEVSKVSHEVHIPGQCSFGQAVLNGINALCGVGILSTPYALREGGWTALSILLIFAVFSFYTGLLLRYCLDSEPGLETYPDIGQAAFGTTGRVLISIILYMELYACCIEYIIVESDNLSSLFPYAHLSLGGIELNSHILFAILTTVALLPTVWLRDLRILSYISACGVIATILVVICLFWVGLLDNVEFHTKGTTTLNLATFPVAVGLYGYCYAGHAVFPNLYTAMANRNQFPAVLLTCFVICTTMYCAVAILGYAMFGETTLSQYTLNMPPALVASKIAVWTTVVNPFTKYPLYIYYAPNRCLCASHICLDSYIYCVEKVIRHKQ. 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04761 464 MobiDBLite consensus disorder prediction 1 53 - -
Seca7g04761 464 MobiDBLite consensus disorder prediction 35 53 - -
Seca7g04761 464 Pfam Transmembrane amino acid transporter protein 154 435 IPR013057 -
Seca7g04761 464 PANTHER OS05G0424000 PROTEIN-RELATED 162 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04761 Seca-Chr7 141275078 141285194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04761 1 434 Amino Acid or Auxin Permease AAAP Family AT2G39130 66.213 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04761 K15015 - gmx:100798108 682.945