Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04758 ATGACCTCAAGGGATTTGTGGCTGCTTCTTTCTTTGCCCGTTGTGGCTTTGGGATTGTTTCACGGCGTGCAGGGTCAACAAACGAGTGACCTCGATAATCCAGTTGTTCTTTCATTTGTTACTCAGCTTGTGTATAGCCAAATCTCCAACTTAACCTCTCTTCTCAATCAAGATATCAACGCCCGCTCCAGTTTCTGCGTCAAAGATCCGGATGCTGATTGGGATAAAGCGTTTAATTTTTCTTCCGATTTAGGCTTCGTTTCTTCTTGCATTCGGAAGACTAAAGGAGATATTACACAACGATTGTGTACAGCAGCAGAGATAAAGTTTTATTTAAATAGTTTATTTGAGAGATCTACAAGTTCCGGCTACTTAAAGCCTAACAAGAACTGCAATTTAACCTCATGGGTATCTGGTTGTGAGCCAGGATGGGCCTGCGGTGTTCTCTCAAGCCAGCAGGTTGACCTTAGAAATTCACAGGAGATACCTGCAAGAACTACAAGCTGTCAAGCATGTTGTGAGGGTTTCTTCTGTCCTCATGGCATAACATGCATGATACCTTGCCCTCTAGGTTCTTATTGCCCTCTTGCTACACTCAATAACGCAACTGGCGTATGTGAACCATATCTCTATCAACTGCCTCCAATGCAGCCAAACCATACCTGTGGTGGAGCAAATATTTGGGCTGATGTCAGTAGCAGTAGTGAGATATTTTGTTCAGCAGGATCATATTGCTCTACAACTACCAAAAAAATTCCTTGCAGTAGTGGGCATTACTGCAGGATGGGTTCTTTATCTGAGAAAAGATGTTTCAAGTTGAGTTCATGTAATTCAAACACCGTGACCCAAAATATGCATGCATATGGAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCTTTATTTACAGCTGTTCTGACAAAGTTCTCACTACTAGGGAAAGGAGAATGGCAAAGTCCAGAGAAGCAGCAGCCAGAAGTGTAAGAAAGACTGCAAATGCACGCCAAAAATGGAAAGCTGCAAAAGAAGCTGCAAAGAAGGGTGCAAGTGGACTGCAAACTCAACTATCACGAACGTTTTCTCGTACAAAGGATGTGGCTGACCCGGAAGAAGTTAAAATTTTGAGTCAATCAACTACAGAAACAGATATTGAATTGTTTTCACCTTCACATCCTATTACATCAAGCATTTTTGAAAGTTCATCTGCAGTGCCAAAGGAAAAAGGAAAAGAACCCAGAGATTTGATGCACATGATACATGAAATTGAAAATGATCCAGATATTAGTGACAGCTTTCATGTTGAAATAGAAAGTAGAGATAAAAATGTTACAGCAAAAGTGTCCAATGAAAAACAGCTGCATACACATAGCCAGATTTTTAAATATGCATATGCTCAACTTGAGAAAGAGAAGGCTCAGCAACAAGAAAACAAGAGCCTTACCTTCTCAGGAATAATTAGTATGGCAACCAAAAATGAACAAAGGAAAAGGCCTTTAATTGAAATTTCTTTCAAAGACCTAACTCTCACTTTGAAAGCACAAAACAAACATATATTGAGATGTGTTACTGGGAAAATTAAACCTGGCCGCATCACTTCTGTCATGGGTCCATCAGGTGCTGGCAAGACAACATTTCTTTCAGCAATAGCTGGAAAGGCATTTGGATGCAAGGTAACTGGTTCCATTTTTATAAATGGAAAGAATGAATCAATCCATTCCTATAAGAAAATCATTGGCTTTGTGCCCCAAGATGATATAGTTCATGGAAACCTGACAGTAGAAGAAAATCTCTGGTTCAGTGCACAGTGCAGGCTATCCGCTGAATTGTCAAAACCAGACAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTCTTGGGTCTTCAGTCTGTGCGAATTTCTTTGGTTGGAACTGTAGAAAAGCGAGGGATCTCTGGTGGCCAAAGGAAACGAGTAAATGTTGGATTGGAAATGGTCATGGAACCTTCTCTTTTGATCTTGGATGAACCCACATCTGGTTTGGACAGTGCATCATCTCTACTGCTCCTTAGAGCACTAAGACGTGAAGCACTTGAAGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGCTATGCCTTGTTTAAAATGTTTGATGACTTGATACTCCTGGTGAAAGGTGGTCTTACTGTATATCATGGATCAGTCAAGAAAGTTGAAGAATACTTTGCAGGCCTTGGGATAACTGTACCTGAGCGCATTAATCCTCCAGATTACTTCATTGACATTTTGGAGGGCATAGCAGTGCCTAGTGGAAGTTCAGGAGTCAGTTATAAAGAGCTTCCAGTTAGATGGATGATTCATAATGGATACCCTGTACCTCTTGATATGCGGCAGAACGTAGAACACTTTGATATGTACCTAAATGTAAACCCATCTAAAGAAATAGATCCTGACAGCTTTAGCCATGCAGAAAGAAGCTTTGCCGGAGAGTTATGGCAAGATGTGAGAAGTGTTGTGGAACTAAAGGGGGAAAAAATAAGACTCAATTTTTTTAAATCCAAGGATTTATCTAACCGGAAAACTCCTGGTATATTCAAGCAATACAAGTACTTCCTTATACGGGTTGGGAAGCAACGATTAGGGGAAGCTAAGAACCAAGCCATAGATTATTTAATATTATTACTTGCAGGAGCGTGCCTAGGATCACTTACTAAAGCAAGTGATCAGTCCTTTGGTGCAGCTGGATACACGTATACGGTGATTGCTGTATCACTTTTATGCAAAATAGCGGCCTTGAGATCATTTGCTCTGGATAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCTTATTTTCTATCTAAAGACACAGTTGATCATTTTAATACAGTAATCAAGCCTGTGTTGTACCTCTCTATGTTCTATTTCTTTACCTATCCAAGGTCTACTTTTGCTGATAATTACATTGTACTTCTTTGTCTTGTATACTGCGTGACTGGCATAGCATATGCACTGGCCATATTCTTTGAACCTGGTGCAGCCCAGCTATGGTCAGTACTTCTTCCAGTTGTTATGACACTCGTTGCAACACAACCAAAAGATAGTAACTTTTTGAAGGTCATAGATAATTTATGCTACTCTAAATGGGCTTTAGAAGCATTCATAATTGCAAATGCTGAAAGGTATCATGGAGTGTGGCTCATAACTCGTTGTGGTTCACTACTGAAACGTGGCTATAGTCTCCATGATTGGAATTTGTGCATATCCATCCTCATTCTTATGGGTGCAATGGCTCGGGCACTAGCATTTTTTTGTATGCTTGTCTTTCAAAAGAAGTAA 3333 0.4035 MTSRDLWLLLSLPVVALGLFHGVQGQQTSDLDNPVVLSFVTQLVYSQISNLTSLLNQDINARSSFCVKDPDADWDKAFNFSSDLGFVSSCIRKTKGDITQRLCTAAEIKFYLNSLFERSTSSGYLKPNKNCNLTSWVSGCEPGWACGVLSSQQVDLRNSQEIPARTTSCQACCEGFFCPHGITCMIPCPLGSYCPLATLNNATGVCEPYLYQLPPMQPNHTCGGANIWADVSSSSEIFCSAGSYCSTTTKKIPCSSGHYCRMGSLSEKRCFKLSSCNSNTVTQNMHAYGIMLIAALSTLLLFIYSCSDKVLTTRERRMAKSREAAARSVRKTANARQKWKAAKEAAKKGASGLQTQLSRTFSRTKDVADPEEVKILSQSTTETDIELFSPSHPITSSIFESSSAVPKEKGKEPRDLMHMIHEIENDPDISDSFHVEIESRDKNVTAKVSNEKQLHTHSQIFKYAYAQLEKEKAQQQENKSLTFSGIISMATKNEQRKRPLIEISFKDLTLTLKAQNKHILRCVTGKIKPGRITSVMGPSGAGKTTFLSAIAGKAFGCKVTGSIFINGKNESIHSYKKIIGFVPQDDIVHGNLTVEENLWFSAQCRLSAELSKPDKVLVVERVIEFLGLQSVRISLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSLLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLVKGGLTVYHGSVKKVEEYFAGLGITVPERINPPDYFIDILEGIAVPSGSSGVSYKELPVRWMIHNGYPVPLDMRQNVEHFDMYLNVNPSKEIDPDSFSHAERSFAGELWQDVRSVVELKGEKIRLNFFKSKDLSNRKTPGIFKQYKYFLIRVGKQRLGEAKNQAIDYLILLLAGACLGSLTKASDQSFGAAGYTYTVIAVSLLCKIAALRSFALDKLHYWRESDSGMSSLAYFLSKDTVDHFNTVIKPVLYLSMFYFFTYPRSTFADNYIVLLCLVYCVTGIAYALAIFFEPGAAQLWSVLLPVVMTLVATQPKDSNFLKVIDNLCYSKWALEAFIIANAERYHGVWLITRCGSLLKRGYSLHDWNLCISILILMGAMARALAFFCMLVFQKK. 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04758 1110 MobiDBLite consensus disorder prediction 345 365 - -
Seca7g04758 1110 Pfam ABC-2 type transporter 701 1110 IPR043926 GO:0140359
Seca7g04758 1110 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 503 745 IPR003439 GO:0005524
Seca7g04758 1110 FunFam ABC transporter G family member 24 497 739 - -
Seca7g04758 1110 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 444 1097 - -
Seca7g04758 1110 Pfam ABC transporter 522 672 IPR003439 GO:0005524
Seca7g04758 1110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 737 IPR027417 -
Seca7g04758 1110 CDD ABCG_EPDR 501 727 - -
Seca7g04758 1110 Gene3D - 501 737 IPR027417 -
Seca7g04758 1110 ProSitePatterns ABC transporters family signature. 644 658 IPR017871 GO:0005524|GO:0016887
Seca7g04758 1110 SMART AAA_5 529 721 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04758 Seca-Chr7 141230998 141250866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04758 498 704 Calmodulin-binding Proteins AT2G36910 28.972 7.45e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04758 - - gmx:100783798 1869.74