Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04718 ATCACCAGAAGGAATCTTAGTGATATTCCCCGGTCTAAAAAAAATCGGAAAAAGATAAGAGTGGAGCGGGAAAAGAAATTCGAAATTTCTCATCTGCTCTCTCTCTCAATTCAACTTCAACTTTCAAATCAATCTGCGTCTCTCTCCCCTCTTTCTCTTTCAGAGCTCCACACTTGGCTGGAATCCGATTCAGCAATGGGCGCCGTAGAGAACTACCACGTGATCGAGCTGGTTGGCGAGGGTTCCTTCGGGAAGGTCTACAAGGGCAGGCGCAAGCACACGGGACAGACTGTTGCGATGAAGTTCATAATGAAGCACGGGAAAACTGAGAAGGACATTCACAATTTAAGACAAGAAATCGAGATCTTAAGAAAGTTGAAGCATGAAAATATTATTCAAATGCTTGATTCCTTCGAAAGCCCGCAAGAATTTTGTGTTGTCACAGAATTTGCACAAGGTGAGCTATTTGAGATTCTTGAGGATGATAAGTGCCTTCCTGAAGAACAAGTTCAAGCAATTGCAAAGCAATTGGTAAGAGCTTTACATTATTTGCACTCCAACAGGATCATACATCGAGATATGAAGCCCCAGAATATTCTTATTGGTGCTGGATCTGTTGTCAAGCTTTGTGATTTTGGATTTGCACGTGCAATGTCCACAAATACAGTTGTTTTGCGATCTATAAAAGGCACTCCATTATACATGGCTCCAGAGCTTGTACGGGAACAACCTTACAACCACACTGTAGATTTATGGTCTCTTGGAGTTATACTGTACGAGTTATTTGTTGGCCAACCACCATTTTACACAAATTCTGTATATGCTCTCATCAGACACATTGTTAAGGATCCGGTTAAATATCCAGATCGCATGAGTCTAAATTTTAAAAGCTTTTTAAAGGGTTTGCTTAACAAGGCACCAGAAAGTCGACTAACTTGGCCTGCTCTTCTTGAACATCCATTTGTTAAAGAAACCTCTGATGAATTTGTAGCCAGGGAATTGCGTGAGATAAATGGTTCACCCATGGATAGTGATACAGCACGGAGGGTTGAAGGAAAAACAATTCAAACTTCATCAGGTTTGGAGGAGAATATTGCTTCACCACTTAAGACTGAAGCTCAGTTAAATGGTCCTAACATAAACAGAACCAATTCTTCAGTGCCTGATGAGTCCCCAGGATTTTCAAATCAAAATGCTGTAGGAGAGTCAGGCTGCCAAAGATTGGACAGACTTGAAAATAACTCTCGCACAGTCAAAGGTGCAAAACTAATTGGTCAAGATAATGAAGCGTTGGGACATATTCTGTTACCGCTGAAAAAATGGTCAAGAGGATCTCAAAATATTTGCAGTGATCAAGATGTTCATGATTCGAACCAGTCACTAAGGATTCTCTCAAACCTAGTTGCAGCCGGTGCCTTCAGTTCTAGTGGACGAATAGATGAACTAATAAGCGAACTCCTTGTGTTTACTAGATCTATTATAGCCATGAAATCTGCTGAAGTTATTGACTTGATGACAAAGAGTTTCTCCATCACTAAAATTTTGCTAGATAATGCTGGGAGTTGCACTTCAAGCTCTTATTTAAATCACTGGGTTGACTTCATTGAAATCTATTCTCAGCAATCACTTATTAATACATATTTGCAGGTTGTAACTTCGATTAATGATGCATCGGGAAGAGTTCTGTTTGAGTCTAGCGCCTGCATTACAGTCATTCTGTCTAAAGTTGCTCAGGTGCTTAAATCATCTCTTCAAAATTCAGGCCCAGAGTCACTGAACGAAACAGCTAAGAGAATTATTGACCATGCGAAAACATCTGGTTTAGTGGACCATTTATGTCTGTGCTTAGCCACTTCAGGCTCGAGTCTTATTTCAGGCTCTTCAACTATGCTGCGGGCTGCTTCTGAAGCATGCAGAGCTCTCTGGTCTCTAATTAATGCACTGGATATCCTTTTTATGAAAAAAAGTGCCATTTTGTTTCCCATAAATGCTTTGCGGAGTCATTCTTTGCAGAGATTGGAAATTGTGGATCGTGAGCAAGATCCCTTGTTTGAAGCAGAATCAACAAAAATAGTTGATGCAATGACAAGAGCATTCCTGAGATCCAAAGCTGTTCAGGTTGCTGTTTACTATTGTTTTCACCAACGTCTTGAGTCTTCAATGAATTGTGGTCTTCAGCTTTTGTCAAGGTGCTGCCTCCATAGTGGAATTGTTCCTGCTCTCCTTTGTGGTCTGCCCAGTTCCCTTCCTGTGACTACTGTTGTCAGTGGTGGTGGTGATGGGACTATTGTTTCAGAAATTTTCTCTGTTTTGTCGTTATGCAGTTCCTCTCTTAACAAAGATGCACATAGTGTAGAACCAAGTAACGTTAAATGCAAATTAACAAATCCATCTGCTTTGGTCCGTCATTCATGTCTCATTCTTGCAATAATTGCACAATGTTTGAAGTCAACTGGAAGAAACTCAGCAATTTTTATACTCACTACCTCACCAAAGAAGCAGCTTGGTCGACTTTCAGTGCTTGCTCATCATATTTCTTCTGAAGATAAAACAAATGCCTCTTCCCAACATCAAAGTGCACCTGCCATGTTGGCTTTGGCGTCCATTCTATCCCTTGAATCTGGGGCTTTGGTTGAGTCTCCAATATCTGAAATTGCTATGCCCTTAATTCCTCGAACTTCTACGCTAAGTGACCATCTTAAGTTTTCATCTGGAAACGAGAACGAATTGGACCCTGGCAACTTTTGTGGGAAGCTTTCGCATTGGCAAGGGGTCAGAGATGGGTGTGTTGGTCTTTTAGATTCTAGACTCAAGTGGGGTGGACCGTTAGCTGTTCAGCAGTTGTGTGCAAGTGGCATACCTCTTCTTCTTATTGGCTTATTAAGCAATGAGTTTCTAAATGCTTCTCAAGTAAATGAGCGCCTAAACAATAGTGTTGGATTATCACCTATTGGTGTTGTATGGACAATTTCATCATTATGTCATTGTCTTTCTGGTGGTGCTTTGACTTTTCGTCAGATTTTGATTAGGAATGAACATATTAAGGTCATCTCCAACTTAATATGTGATGTTCATCTCAAGTTGATAAAATGCTGGATTGGACCTGGTGGAGGGAGAGCAGGAGTCAGAGATCTAATAAATGCAGTAATAGATCTGTTAGCATTTCCTTTTGTTGCTCTACAAAATGCACCTGGCTTGCCATCAGCCACTGCTTCTGTAAGCAGTGGGTTTCTTCTTAACGTTGGTTCCCCTGGTCAGAGAGTATGCATGGAAGACAAGGATGTAGTTAAGGCAATAGAAGAAGACATGGGCAAATACATTAAGATCCTTGTGGAGGTGGGTGTGCCTGGTATTATCCTTCGATGCCTAGATCATATGGAGTTGAATGATTTGGGCAGGCCTGTAGCCTTTCTCGCTAAAATGGCGTGCCACCGACCTTTAGCAGTCCAACTTGTCAGTAAAGGTCTTCTGGACCCAAATAGGATGAGAAGGTTGTTTGACTATTCGGGCCCAAAAGAGGTCACCCTGGATGCCCTTATGATAATTTCTGATCTTGCTCGCATGGACAAGGGATTCTATGAGTACATTAAAGGTGCTTCTATTTTGGAGTTCTTAAAAGATTTTCTTTCTCATGAGGATCCCAATATGCGTGCCAAAGCTTGCAGTGCTCTTGGAAACATGTGCCGCCATAGCGCCTACTTTTATAGTTCACTTGCAAGACATCAAATTGTTGGTATTCTTATCGATCGGTGCTCTGATCCGGACAAACGAACACGGAAATTTGCTTGTTTTGCTATTGGAAATGCGGCCTACCACAATGACGTGTTGTATGAAGAGCTGAGGAGATCGATTCCTCAATTGGCAAATTTGTTGCAAATGGCAGAGGAGGACAAGACTAAGGCAAATGCAGCAGGTGCACTTAGCAATCTGGTTCGCAACTCTGACAAGCTTTGTGAAGACATTGTGTCAAAAGGAGCGATTCAGTCTCTCCTGAAGTTAATTTCCGATTGTGCTGTATTGGCACTAAATCCCAGCAGAAATGATTCGACAAATGAATCTCCTTTAAAGATAGCTCTCTTTTCCTTAGCAAAGATGTGTGCACACCCTCTCTGCAGACAGTTCATCCGTTCATCACCTTTGTTCCCTGTGATTGGAAGGCTTCAGCAGTCTCCAGAATCATCCGTTGCCAAGTATGCCTCCGTGATTATTAGCAAAGTTGCTGAACCTTGA 4230 0.4165 ITRRNLSDIPRSKKNRKKIRVEREKKFEISHLLSLSIQLQLSNQSASLSPLSLSELHTWLESDSAMGAVENYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDRMSLNFKSFLKGLLNKAPESRLTWPALLEHPFVKETSDEFVARELREINGSPMDSDTARRVEGKTIQTSSGLEENIASPLKTEAQLNGPNINRTNSSVPDESPGFSNQNAVGESGCQRLDRLENNSRTVKGAKLIGQDNEALGHILLPLKKWSRGSQNICSDQDVHDSNQSLRILSNLVAAGAFSSSGRIDELISELLVFTRSIIAMKSAEVIDLMTKSFSITKILLDNAGSCTSSSYLNHWVDFIEIYSQQSLINTYLQVVTSINDASGRVLFESSACITVILSKVAQVLKSSLQNSGPESLNETAKRIIDHAKTSGLVDHLCLCLATSGSSLISGSSTMLRAASEACRALWSLINALDILFMKKSAILFPINALRSHSLQRLEIVDREQDPLFEAESTKIVDAMTRAFLRSKAVQVAVYYCFHQRLESSMNCGLQLLSRCCLHSGIVPALLCGLPSSLPVTTVVSGGGDGTIVSEIFSVLSLCSSSLNKDAHSVEPSNVKCKLTNPSALVRHSCLILAIIAQCLKSTGRNSAIFILTTSPKKQLGRLSVLAHHISSEDKTNASSQHQSAPAMLALASILSLESGALVESPISEIAMPLIPRTSTLSDHLKFSSGNENELDPGNFCGKLSHWQGVRDGCVGLLDSRLKWGGPLAVQQLCASGIPLLLIGLLSNEFLNASQVNERLNNSVGLSPIGVVWTISSLCHCLSGGALTFRQILIRNEHIKVISNLICDVHLKLIKCWIGPGGGRAGVRDLINAVIDLLAFPFVALQNAPGLPSATASVSSGFLLNVGSPGQRVCMEDKDVVKAIEEDMGKYIKILVEVGVPGIILRCLDHMELNDLGRPVAFLAKMACHRPLAVQLVSKGLLDPNRMRRLFDYSGPKEVTLDALMIISDLARMDKGFYEYIKGASILEFLKDFLSHEDPNMRAKACSALGNMCRHSAYFYSSLARHQIVGILIDRCSDPDKRTRKFACFAIGNAAYHNDVLYEELRRSIPQLANLLQMAEEDKTKANAAGALSNLVRNSDKLCEDIVSKGAIQSLLKLISDCAVLALNPSRNDSTNESPLKIALFSLAKMCAHPLCRQFIRSSPLFPVIGRLQQSPESSVAKYASVIISKVAEP. 1410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04718 1409 Gene3D Transferase(Phosphotransferase) domain 1 63 378 - -
Seca7g04718 1409 Pfam Protein kinase domain 72 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04718 1409 PANTHER PROTEIN KINASE RELATED 69 1406 - -
Seca7g04718 1409 Coils Coil 106 126 - -
Seca7g04718 1409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Seca7g04718 1409 FunFam Aurora kinase A 65 154 - -
Seca7g04718 1409 CDD STKc_STK36 70 322 - -
Seca7g04718 1409 FunFam Serine/threonine-protein kinase TIO 1136 1405 - -
Seca7g04718 1409 SUPERFAMILY Protein kinase-like (PK-like) 67 331 IPR011009 -
Seca7g04718 1409 Coils Coil 1277 1297 - -
Seca7g04718 1409 SMART arm_5 595 646 IPR000225 GO:0005515
Seca7g04718 1409 SMART arm_5 1313 1367 IPR000225 GO:0005515
Seca7g04718 1409 SMART arm_5 1272 1312 IPR000225 GO:0005515
Seca7g04718 1409 SMART arm_5 1189 1229 IPR000225 GO:0005515
Seca7g04718 1409 ProSiteProfiles Protein kinase domain profile. 72 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04718 1409 SUPERFAMILY ARM repeat 1102 1406 IPR016024 -
Seca7g04718 1409 FunFam Serine/threonine-protein kinase 36 69 383 - -
Seca7g04718 1409 MobiDBLite consensus disorder prediction 364 404 - -
Seca7g04718 1409 SMART serkin_6 72 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04718 1409 ProSitePatterns Protein kinases ATP-binding region signature. 78 105 IPR017441 GO:0005524
Seca7g04718 1409 Gene3D - 1133 1406 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04718 Seca-Chr7 140466680 140483807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04718 61 311 AGC Kinase Gene Family AT3G08720 38.340 4.24e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Seca7g04718 Pkinase 4.8e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04718 K06228 - gmx:100792102 2291.54