Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04712 ATGAGAATGCCGGGCATTCCTGTCGTGGCTCGTGCAACCTCATGCCATCCTGATGCTTGTGAGCATTTATCTGCGGAAGAGGGGCATGGTGCAGATGAGAGTCTTTCAATTTATTGCAAGCCTGTAGAGCTCTACAACATTCTTCAGCGACGTGCTATAAGAAATCCATCATTCCTTCAGAGATGTTTGCACTACAAGATACAGGCTAAGCACAAGAGAAGAATACAAATGACAGTTTCTCTGTCACGGACTGTTACTGAAAGCCAGACTGTGTTTCCATTGTATATCTGTCTGGCTAGGCTGATTTCTGATCTTGGAGTTCCAGAGTATTCTGCTGTGTATCGAATCAGTCGGATTTTCATCTTTCGAAATTCCCCTGGAATTGATTCGAACACTCAAGTCCAAGCAAAATTTACTCTTCCTGAAGTCAATAAGTTAGCTGTGGAAGCTAGATCTCGTTCACTTGCTGTCTTGTTTGTCAGCACCGTTGCAGTGGAAAACTCAAATTTATCATCTGGAGTCAATGCTAACTTGACGCCTTCGGATCTGCCTTCTTTTGAATCAGCAAGAGCTGGAGAATATTGCTTATGCGGGAAAGTATCTTTAGAATCACTTTATATGGCTTGGGACAGTTCTCCAAATTTTCATTTGGGACAGCGAGCTGAGATCATGTCAACTGTGGATTTGCTTCCGTGCATTCTGAAGTCAGATTTTCAAAATGAGGACACAAGAGTCTCCATTCAAGTTCCCTGTAATTTGGAGAATGTGGGTACATCAAAGCAAGTACAAATCACAATTTCCGCAGAAGAGTTTGGTGCAAAAGAAAAATCTCCCTATCATTCATATGCAGGCAGTGAAGTACCACCATCATCATTAACTCGTATCATGCGGTTGAGGGAAGGAAATGTCATGTTTAATTACAGGTATTGCAATAATAAGTTGCAGAGAACAGAAGTCACGGAAGATTTCTCCTGTCCGTTCTGTTTGGTTAGGTGTGCTAGCTTTAAGGGTCTAAGATATCACTTGACCTCATCACATGATCTCTTCAACTTTGAATTTTGGGTATCGGATGAATGTCAGGCCGTAAATGTGTCTGTGAAAACTGATATCTGGAGATTTGAGATTGTTGCAGATGGCATTGATCCAAAATTACAAACATTTTTCTTTTGTGCAAAGCCCCTTAGGCGCAGAAGACCAAAGAACCTATCTTTGAAAAATGCTAAGGATGCACATCAATCGGTCTTAGAGTCTGACTTTCCTGCAGGGGACACTAATATTTTGGAGAAGGATGATGGGATTTCTACCACAAATGTTCTATCACATCCTGACTCAGACTGTGTCCAATCAATATCTGAATATGATCTTGGCACTCCTGCTGTGCTTCAGTTTGCCAAGACAAGAAAGTTATCAATGGAGCGTTCTGACCCACGAAACTGCGTCCTCTTAAGGAAGCGACAGTTTTTTCACTCTCACAGAGCCCAGCCAATGGCAATTGAACAAGTTCTATCAGATCAAGATAGTGAGGATGAAGTTGATGATGATGTTGCAGATTTTGAAGATCGAAGGATGCTTGACAATTTTGTTGATGTGAGCAAAGTTGAGAAGCGAGTAATGCATCTTTGGAACTCCTTTGTGCGGAAGCAACGTGTGCTAGCAGATGGTCACATTCCATGGGCATGTGAGGCTTTCACAAAATTGCATGCCCCTGAGCTTTCCCAATCCAGCTCATTGGCAAGGTGCTGGAGACTCTTTATGATCAAATTATATAATCATGGTCTTCTAGATGCAAGGACCATGAATGACTGTAATATTATTCTTGGACAACATCCGAAGCAGAATTAA 1842 0.4186 MRMPGIPVVARATSCHPDACEHLSAEEGHGADESLSIYCKPVELYNILQRRAIRNPSFLQRCLHYKIQAKHKRRIQMTVSLSRTVTESQTVFPLYICLARLISDLGVPEYSAVYRISRIFIFRNSPGIDSNTQVQAKFTLPEVNKLAVEARSRSLAVLFVSTVAVENSNLSSGVNANLTPSDLPSFESARAGEYCLCGKVSLESLYMAWDSSPNFHLGQRAEIMSTVDLLPCILKSDFQNEDTRVSIQVPCNLENVGTSKQVQITISAEEFGAKEKSPYHSYAGSEVPPSSLTRIMRLREGNVMFNYRYCNNKLQRTEVTEDFSCPFCLVRCASFKGLRYHLTSSHDLFNFEFWVSDECQAVNVSVKTDIWRFEIVADGIDPKLQTFFFCAKPLRRRRPKNLSLKNAKDAHQSVLESDFPAGDTNILEKDDGISTTNVLSHPDSDCVQSISEYDLGTPAVLQFAKTRKLSMERSDPRNCVLLRKRQFFHSHRAQPMAIEQVLSDQDSEDEVDDDVADFEDRRMLDNFVDVSKVEKRVMHLWNSFVRKQRVLADGHIPWACEAFTKLHAPELSQSSSLARCWRLFMIKLYNHGLLDARTMNDCNIILGQHPKQN. 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04712 613 CDD VEFS-box_EMF2-like 482 606 - -
Seca7g04712 613 Pfam VEFS-Box of polycomb protein 469 604 IPR019135 -
Seca7g04712 613 CDD ZnB-Zn_EMF2-like 297 371 - -
Seca7g04712 613 PANTHER POLYCOMB GROUP PROTEIN 22 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04712 Seca-Chr7 140295651 140316072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04712 3 608 C2H2 Transcription Factor Family AT5G51230 56.162 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04712 - - gmx:100798991 927.161