Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04698 ATGGGGAACACATGTGTTGGTCCTAGCATTTCAAAAAATGGTCTTATTCAATCAGTTTCTGCAGCAATTTGGCGGTCCCAATCGCCTGAAGGATCAGTGTCTAATAGAGAATCTGTAAATGAGGGAACAACTAATGAGCCTGAATCACCCTTACCTGTCCAAAACAAACCTCCTGAGCAGATAACTATGCCAAAACCAGAGACAAAACAAGAAACAAAATCTGAAATGGAACCGGAAAAAGAAAAGGAAAAGGAAAAGGAAAAGAAGAAATCCAGGAAACCTGCTTCTGTGAAGAGAGTTTCTAGTGCAGGACTTCGTGTTGATTCTGTGTTACTGAGAGAAACTGGTAATTTCAAAGAGTTCTTCAGTCTGGGGAGAAAACTTGGACAGGGTCAGTTTGGGACAACATTCTTGTGTGTGGAGAAGGCAACTGGACATGAGTATGCCTGTAAATCTATTGCAAAGAGGAAGCTGGTAACTGATGACGATGTTGAAGATGTGAGAAGAGAAATTCAGATAATGCACCATTTGGCCGGGCATCCTAATGTTATATCCATCAAAGGTGCTTATGAGGATGCAGTGGCTGTTCATGTTGTGATGGAATTATGTGCAGGTGGTGAGCTTTTTGATAGGATTATTCAGCGTGGGCATTATACTGAAAGAAAGGCAGCTGAACTTACTAGGACTATAGTTGGGGTTGTGGAAGCTTGTCATTCACTAGGTGTGATGCACCGAGACCTTAAACCTGAGAATTTTCTCTTTGTCAATAAGCATGAGGATTCACTTCTCAAAACCATTGACTTTGGATTATCTGTGTTCTTTAAGCCAGGAAGTAAATTGATTGCATGGAGAAAAACTGATGATATTTTGCTTCCAGGTGATATATTTACCGATGTGGTTGGCAGCCCATATTATGTTGCCCCAGAAGTTTTGCGGAAGCGTTATGGTCCTGAAGCAGATGTTTGGAGTGCTGGAGTTATCCTTTACATTCTTTTGAGTGGAGTACCTCCATTTTGGGCTGAAAGCGAACAAGGAATATTTGAGCAGGTTCTGCGTGGTGATCTTGACTTCACTTCAGATCCATGGCCTGGAATTTCTGAAAGTGCAAAAGATTTAGTAAGGAAAATGCTTGTTCGCGACCCTAGAAGGCGGTTGACTGCACATCAAGTATTATGTCATCCTTGGATTCAAGTTGATGGTGTAGCTCCTGACAAGCCACTTGACTCCGCAGTATTAAGTCGCTTGAAGCAATTTTCTGCAATGAACAAGCTCAAAAAAATGGCTCTTATAATCATTGCAGAGAGCTTATCTGAAGAAGAAATAGCTGGCTTAAAAGAAATGTTCAAGATGATAGATGCAGACAACAGTGGTCAAATCACTTTTGAAGAACTTAAAGCTGGTTTGAAAAGAGTGGGTGCTAATCTTAAGGAGTCTGAAATTTATGATTTAATGCAAGCGGCTGATATAGATAACAGCGGGACAATTGATTACGGTGAATTCCTTGCCGCAACACTGCATCTTAACAAGATTGAAAGAGAAGATCATCTATTTGCAGCCTTTTCTTACTTTGATAAAGATGGAAGTGGCTATATTACTCATGAAGAACTTCAACAGGCTTGTGATGAGTTTGGCATAAAAGACGTCCGCTTGGAAGAGATAATCAAGGAAATTGATCAAGATAATGATGGACGCATAGATTATAATGAGTTTGTGGCTATGATGCAGAAAGGAAATCTTCCTGTGGTTGGTAAAAAGGGCCTAGAAAATAATTTCAGCATTCGTTTCAGGGAGGCATTAAAATTGTAG 1806 0.4037 MGNTCVGPSISKNGLIQSVSAAIWRSQSPEGSVSNRESVNEGTTNEPESPLPVQNKPPEQITMPKPETKQETKSEMEPEKEKEKEKEKKKSRKPASVKRVSSAGLRVDSVLLRETGNFKEFFSLGRKLGQGQFGTTFLCVEKATGHEYACKSIAKRKLVTDDDVEDVRREIQIMHHLAGHPNVISIKGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVNKHEDSLLKTIDFGLSVFFKPGSKLIAWRKTDDILLPGDIFTDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWAESEQGIFEQVLRGDLDFTSDPWPGISESAKDLVRKMLVRDPRRRLTAHQVLCHPWIQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALIIIAESLSEEEIAGLKEMFKMIDADNSGQITFEELKAGLKRVGANLKESEIYDLMQAADIDNSGTIDYGEFLAATLHLNKIEREDHLFAAFSYFDKDGSGYITHEELQQACDEFGIKDVRLEEIIKEIDQDNDGRIDYNEFVAMMQKGNLPVVGKKGLENNFSIRFREALKL. 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04698 601 ProSitePatterns EF-hand calcium-binding domain. 558 570 IPR018247 -
Seca7g04698 601 ProSitePatterns EF-hand calcium-binding domain. 524 536 IPR018247 -
Seca7g04698 601 CDD STKc_CAMK 121 395 - -
Seca7g04698 601 ProSiteProfiles EF-hand calcium-binding domain profile. 549 580 IPR002048 GO:0005509
Seca7g04698 601 Gene3D Phosphorylase Kinase; domain 1 124 207 - -
Seca7g04698 601 ProSiteProfiles EF-hand calcium-binding domain profile. 475 510 IPR002048 GO:0005509
Seca7g04698 601 Pfam EF-hand domain pair 444 504 IPR002048 GO:0005509
Seca7g04698 601 Pfam EF-hand domain pair 514 575 IPR002048 GO:0005509
Seca7g04698 601 ProSiteProfiles Protein kinase domain profile. 122 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04698 601 FunFam Calcium-dependent protein kinase SK5 208 408 - -
Seca7g04698 601 MobiDBLite consensus disorder prediction 66 90 - -
Seca7g04698 601 ProSiteProfiles EF-hand calcium-binding domain profile. 439 474 IPR002048 GO:0005509
Seca7g04698 601 Gene3D Transferase(Phosphotransferase) domain 1 208 420 - -
Seca7g04698 601 ProSitePatterns Protein kinases ATP-binding region signature. 128 155 IPR017441 GO:0005524
Seca7g04698 601 FunFam Calcium-dependent protein kinase 1 404 578 - -
Seca7g04698 601 PANTHER SERINE/THREONINE-PROTEIN KINASE 103 570 - -
Seca7g04698 601 SMART serkin_6 122 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04698 601 SUPERFAMILY Protein kinase-like (PK-like) 122 397 IPR011009 -
Seca7g04698 601 ProSitePatterns EF-hand calcium-binding domain. 488 500 IPR018247 -
Seca7g04698 601 Gene3D - 421 580 - -
Seca7g04698 601 MobiDBLite consensus disorder prediction 24 99 - -
Seca7g04698 601 SMART efh_1 549 577 IPR002048 GO:0005509
Seca7g04698 601 SMART efh_1 515 543 IPR002048 GO:0005509
Seca7g04698 601 SMART efh_1 443 471 IPR002048 GO:0005509
Seca7g04698 601 SMART efh_1 479 507 IPR002048 GO:0005509
Seca7g04698 601 SUPERFAMILY EF-hand 436 576 IPR011992 -
Seca7g04698 601 CDD EFh 444 503 IPR002048 GO:0005509
Seca7g04698 601 FunFam Calcium-dependent protein kinase 1 124 207 - -
Seca7g04698 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Seca7g04698 601 ProSitePatterns EF-hand calcium-binding domain. 452 464 IPR018247 -
Seca7g04698 601 ProSiteProfiles EF-hand calcium-binding domain profile. 511 546 IPR002048 GO:0005509
Seca7g04698 601 Pfam Protein kinase domain 123 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04698 601 MobiDBLite consensus disorder prediction 24 50 - -
Seca7g04698 601 CDD EFh 515 575 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04698 Seca-Chr7 140152447 140158767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04698 1 601 EF-hand Containing Proteins AT5G04870 75.710 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca7g04698 Pkinase 2.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04698 K13412 - gmx:100797449 1029.62