Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04691 ATGGCGAAGGAAGTAGAGGGGTTCAAGTTCGAACAGAGGCATGGAAAGGAGAGGGTGAGAGTTGCTCGCGTGTGGAAAGCCAAAGATGGACGCCACTTCATTGTGGAGTGGCGTGTCAGCATCAGCCTCCTCTCTGATTGCGTCGATTCCTATCTCCGTGATGACAATAAAGACATCGTTGCCACTGACACCATGAAGAACACCGTCTATGCAAAAGCAAAGGAGTTCTCAGAAATACTTTCCGTGGAGGACTTTGCTATTGAACTTGCCAAACACTTCACATCATTTTACAAGCAGGTTACTACTGCTATTGTGAATATTGTGGAAAAGCCCTGGGAGCGTGTTAGTGTGGATGGTCAACCTCATCAACATGGGTTCAAACTTGGATCTGAGAAGCATACAGCAGAGGCAATAGTAAAAAAGTCTGGTGCACTGCAGTTGACTTCTGGTATTGAAGGATTTTCATTGTTGAAGACTACCAAGTCTGGTTTTGAGGGTTTTATCAGAGACAAGTACACAGCACTTCCTGAAACACGTGAAAGGATGCTGGCAACAGAAGTAACTGCACTATGGAGGTACACATATGAATCGCTGTATAGCATCCCTCAGAAGCCACTTTATTTTACAGACAGGTACTTGGATGTAAAAAGAGTTCTGACTGACACCTTTTTTGGCTCTCCAAAGGAGGGAGTCTATAGCCCATCTGTTCAAAGCACTCTCTACCAGATGGCAAAAGCCGCACTTAACAGATTTCCTGACATAGCTTCTGTCCAACTAAAGATGCCAAATATTCATTTCATACCAGTCAATATCTCAAACAAGGACGGTCCAATTGTAAAGTTTGATGATGATGTGTATTTACCAACGGATGAGCCACATGGATCAATTCAGGCTAGCTTGAGCCGCAGTTGGTCAAGCCCTGAAAGTTGCACCAATGGTGAATTGCTTTGTATGGGTTCAGCCACTGCTGGCAATGGGTATATAAGTCTCACGCCAGAGCCACAAAGCAGCAATGCAAGTTCTGTGTCATCTTCCGTAGCCAACAAAGTAGGACGTGTCATGTACCCTCATCCAGTGCATGCTTGGCCAGCAGTTATCTCTACCACCTTCACTCTTAGGATCAGTCCCTTTTCAAGAAACTCAACCAGTTCTGGTGATGGAATGGCACTAGTGTTTGCACAAGATAATAGACCCTCACCAAATGATAGCTATGGCTCATACCTTGGCATGTTTGATAGATCTACACAAGGTGGTGTTTTTAGACAAATAGCTGTGGAGATGGACACTTTCATGAATGAATTTGATCCAGATGGAAACCACATTGGGATAGTCACAACAAGCATCACAAATCCAGTTGCTTCTCAGAGTCTCAACAACACTGGCGTTGACCTCAAAAGTGGAAGAGACATTGAAGTTAAAGTTGATTATAATGGATGGACTAAAATGATTTATGTTTCTGTGGGATACCCTGAAAGCCAATTAAAGAGTGTTCTTAACCATTCAATTACTCTACCTGATATAATTCCAAGCTCAGTTTTTGTTGGTTTCACAGCCTCCACTGGCAAGACTTTTCCTGAAAGCCATCAAGTCCTCAATTGGGTATTCACATCAGTGCCATTGCCAGTTCTTTCTGTTAAACCCAGTAAACTTGACACCATCAAGATCATATTGATAATTGTCATACCAGTGTTTTTGTCAGCAAGCTTAGTTCCTCTTATTTGGGAAGTTTGGAAGAGAAGACATGAGAGGGGTAACAAAAAGGAGGATATAGAAAGCCTATCAAGGACAGTACCAGATAACCCCAAGATGTTCACTTACAAGCAACTTTCAAAGGCCACATGCAACTTCAGGAAAGAAAATCTTTTGGGCAGAGGGGGATTTGGCAGTGTTTATAAAGGCATCATATTAGACTCTGGTAAAATAATAGCAGTAAAGAAGGTTTCAGCAACCTCTAAGCAAGGTGAAAGAGAGTTCTTAGCTGAAATATGTACCATAGGGCGTCTTAGGCACAAAAACTTAGTGCAGCTCCAAGGTTGGTGCAATGAAGGTCAGAATCTTCTTTTGGTTTATGATTATATGCAAAATGGAAGCCTTGACCGGTTCATAGGTAAGGACATTCTGGATTGGCAAACCAGACACAAGATATTGACAGGATTGGCATCAGCATTACTATACCTTCATGAAGAGTGTGGAAACCCTGTAGTTCACAGAGATGTTAAGCCTAACAATGTAATGCTGGATTCTAATTACAATGCTCATTTAGGAGATTTTGGTTTAGCAAGATTACTAAAAAATGAGGACTCAGTTACTACAAACTTAGCTGGAACTCCAGGATATTTGGCCCCTGAAGTAGGCTTTACAGGGAAGGCCACCCCTGAATCAGATGTGTATAGCTTTGGCATGGTTGTACTTGAGGTCATATGTGGGAAAAGGTCAAAATGTATTATGGAAGAGAACAGTTTGGTAGACTATGTGTGGAATTTGCATGCTCAAAATTCATTGCTTGAGTGTGTTGACAAACAACTGAAAAACCAATTTGATGAGGAAGAAGCTAAGAGGGCATTGATGGTTGGATTGGCATGTTTGCATCCAGATTCCATGTTTAGGCCAAGGATGAGAAAAGTGGTGCACATTTTTCTGAATCCAAATGAACCTTTAATGGAATTACCAGGAATGAGACCCACTGGAGTTTATGTATCAGTTTCTTCTTGTACTTCAATCACAGACTTTGGCTCTAGAGGTGAGTTACAGCTCCCATCATCCATAACATCATTGCACAAAAGTTCAATTCCTATGAAGTATGATCAGCAGTGA 2814 0.419 MAKEVEGFKFEQRHGKERVRVARVWKAKDGRHFIVEWRVSISLLSDCVDSYLRDDNKDIVATDTMKNTVYAKAKEFSEILSVEDFAIELAKHFTSFYKQVTTAIVNIVEKPWERVSVDGQPHQHGFKLGSEKHTAEAIVKKSGALQLTSGIEGFSLLKTTKSGFEGFIRDKYTALPETRERMLATEVTALWRYTYESLYSIPQKPLYFTDRYLDVKRVLTDTFFGSPKEGVYSPSVQSTLYQMAKAALNRFPDIASVQLKMPNIHFIPVNISNKDGPIVKFDDDVYLPTDEPHGSIQASLSRSWSSPESCTNGELLCMGSATAGNGYISLTPEPQSSNASSVSSSVANKVGRVMYPHPVHAWPAVISTTFTLRISPFSRNSTSSGDGMALVFAQDNRPSPNDSYGSYLGMFDRSTQGGVFRQIAVEMDTFMNEFDPDGNHIGIVTTSITNPVASQSLNNTGVDLKSGRDIEVKVDYNGWTKMIYVSVGYPESQLKSVLNHSITLPDIIPSSVFVGFTASTGKTFPESHQVLNWVFTSVPLPVLSVKPSKLDTIKIILIIVIPVFLSASLVPLIWEVWKRRHERGNKKEDIESLSRTVPDNPKMFTYKQLSKATCNFRKENLLGRGGFGSVYKGIILDSGKIIAVKKVSATSKQGEREFLAEICTIGRLRHKNLVQLQGWCNEGQNLLLVYDYMQNGSLDRFIGKDILDWQTRHKILTGLASALLYLHEECGNPVVHRDVKPNNVMLDSNYNAHLGDFGLARLLKNEDSVTTNLAGTPGYLAPEVGFTGKATPESDVYSFGMVVLEVICGKRSKCIMEENSLVDYVWNLHAQNSLLECVDKQLKNQFDEEEAKRALMVGLACLHPDSMFRPRMRKVVHIFLNPNEPLMELPGMRPTGVYVSVSSCTSITDFGSRGELQLPSSITSLHKSSIPMKYDQQ. 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04691 937 Gene3D Urate Oxidase; 7 304 - -
Seca7g04691 937 FunFam probable L-type lectin-domain containing receptor kinase S.5 693 887 - -
Seca7g04691 937 Pfam Uricase 148 297 IPR002042 -
Seca7g04691 937 Pfam Uricase 13 136 IPR002042 -
Seca7g04691 937 SUPERFAMILY Protein kinase-like (PK-like) 598 898 IPR011009 -
Seca7g04691 937 PRINTS Uricase signature 55 69 IPR002042 -
Seca7g04691 937 PRINTS Uricase signature 92 105 IPR002042 -
Seca7g04691 937 PRINTS Uricase signature 170 182 IPR002042 -
Seca7g04691 937 PRINTS Uricase signature 154 170 IPR002042 -
Seca7g04691 937 PRINTS Uricase signature 15 26 IPR002042 -
Seca7g04691 937 Pfam Legume lectin domain 314 538 IPR001220 GO:0030246
Seca7g04691 937 NCBIfam urate oxidase 11 302 IPR002042 -
Seca7g04691 937 FunFam Uricase 6 307 - -
Seca7g04691 937 CDD Uricase 13 302 - -
Seca7g04691 937 Pfam Protein kinase domain 617 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04691 937 ProSitePatterns Protein kinases ATP-binding region signature. 622 646 IPR017441 GO:0005524
Seca7g04691 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Seca7g04691 937 SMART serkin_6 616 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04691 937 CDD lectin_legume_LecRK_Arcelin_ConA 311 537 IPR001220 GO:0030246
Seca7g04691 937 SUPERFAMILY Concanavalin A-like lectins/glucanases 311 538 IPR013320 -
Seca7g04691 937 Gene3D Phosphorylase Kinase; domain 1 601 692 - -
Seca7g04691 937 FunFam probable L-type lectin-domain containing receptor kinase S.5 601 692 - -
Seca7g04691 937 PANTHER - 340 881 - -
Seca7g04691 937 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 10 132 - -
Seca7g04691 937 FunFam Putative L-type lectin-domain containing receptor kinase S.7 298 549 - -
Seca7g04691 937 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 143 303 - -
Seca7g04691 937 Gene3D - 305 545 - -
Seca7g04691 937 CDD STKc_IRAK 622 879 - -
Seca7g04691 937 ProSiteProfiles Protein kinase domain profile. 616 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g04691 937 Gene3D Transferase(Phosphotransferase) domain 1 693 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04691 Seca-Chr7 140008446 140017904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04691 308 915 Receptor kinase-like Gene Family AT5G55830 39.850 5.61e-123 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca7g04691 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04691 - - ccaj:109810929 979.933