Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04663 GCATTGATAGAAACTATAACATACTCCTTTTGCTTGCAAGAAGAAATCCTTCTTGTAAGTGTTAAGTTGTCAGTTCTGCTCAATTATTTGAGTTGGGTTATTATTAATATAGGTGATGAGGCTGAAAATAACGACAATTCAAACTTGAACATGGATTGCTCTACAGTTGTGAGAGTTAGAACACTACACATCAGTTCTCCTATCTTACCTGCTAAAAGTCCTTTCTTCTACAAGCTTTTCTCAAATGGGATGAGGGAGTCAGAGCAGAGGCATGTTACCTTGAGAATTACTGCTTCTGAGGAAGCTGCTCTCATGGAGCTTCTGAATTTTATGTATAGTAACACCTTGAGCATTACTTCACCACCTGCTTTATTGGATGTGTTGATGGTTGCTGACAAATTTGAAGTTGCTTCATGTATGAGATACTGCAGCCGATTATTGCGGAATATACCTATGACACCTGAGTCTGCATTGCTTTACCTTGAGCTTCCTTCTAGTGTACGTTAA 507 0.3866 ALIETITYSFCLQEEILLVSVKLSVLLNYLSWVIINIGDEAENNDNSNLNMDCSTVVRVRTLHISSPILPAKSPFFYKLFSNGMRESEQRHVTLRITASEEAALMELLNFMYSNTLSITSPPALLDVLMVADKFEVASCMRYCSRLLRNIPMTPESALLYLELPSSVR. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04663 168 Gene3D Potassium Channel Kv1.1; Chain A 39 167 IPR011333 -
Seca7g04663 168 FunFam BTB/POZ domain-containing protein POB1 44 168 - -
Seca7g04663 168 SUPERFAMILY POZ domain 43 148 IPR011333 -
Seca7g04663 168 SMART BTB_4 31 151 IPR000210 GO:0005515
Seca7g04663 168 ProSiteProfiles BTB domain profile. 51 120 IPR000210 GO:0005515
Seca7g04663 168 PANTHER OS02G0260700 PROTEIN 42 167 IPR045890 -
Seca7g04663 168 Pfam BTB/POZ domain 48 148 IPR000210 GO:0005515
Seca7g04663 168 CDD BTB_POZ_ZBTB_KLHL-like 52 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04663 Seca-Chr7 139552856 139553543 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Seca7g04663 BTB 4.5e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04663 - - gmx:100781329 238.81