Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04652 ATGCAAGAATGGTATAAAGTATTGAACAGTGAGATATGGGATCTGCAAGATCATGAGAGTAATATTCTTCCAGCTTTGAGATTAAGTTACCATTACCTCCCTTCTCATTTAAAGAGGTGTTTTGCTTATTGTGCAATTTTCCCAAAAGATTATGAATTTGAAAAGGAGAACTTGATTTTGTTATGGATGGCAGAAGGTTTGCTCCAACAATCAAAGAGACATAGAAGAATTGAAGAAGTTGGAAATGAGTATTTTTGTGAACTAGTATCCAGATCATTTTTCCAACAATCAAGACGTGGCAAGTCATGTTTCCTAATGCATCATCTCATAAATGACTTAGCTCAGTTTGTTTCTGGGACATTTTCTGTCAAAATGGAAGGTAACAGTTCTAATGAAATTGAGGAAAGAACTAGACATTTGTCCCACATTATTGCTCATAGTTCCTCATATGTAAACCTGAAAGATGTTAGCAAAGCAAATCACCTACGCACCTTTCTGCAAATAAGAACAATAGGTACATCCATTGACTTGTTCAACAACATGCCAAATGATCTGTTCACAAAGTTAAGGTACCTAAGGGTGTTATCTTTGGTAGGTGCATATTTCTATAGTTTACCTGATTCAATAGGTGAACTAAAACATCTGCGCTATCTAGAAGTGTTTGACACTGAGATTATCAAGCTACCTGAATCCATCTGCAGTTTGTACAATTTACAAACTCTGAAGTTAGTTGGATGTTATAAACTTATTGAACTGCCAACAGATATTCATAAACTTGTCAACTTGCGCTACTTGGATATTAGAGGCACTTGTTTGAAGTGGATGCCATTGCAAATCAGTGAGTTAAAAAGCCTCCAAAAGTTGAGTGACTTTTTTGTAGGAGAAGATTATGGATCTTCCATTGGTGAATTGGGAGAGCTATCTAATTTACATGGAGCATTGTTCATCCATTACATAGAAAATGTTGTTAATCACAAGGATTCTGAGAAGGCAAAGTTGAAGGAAAAGAATGGCCTTGAAAAGTTGTCTTTGGATTGGGGTGGGAATGGTGATACTGAAAACTCACAGCATGAAAAAGCCATACTAGACAGCCTGCAACCTCATACTAATTTGAAGGAGCTTGATATCTATGAGTATCCAGGCACAGAATTTCCAAATTGGTTGGGGGACTACTCCTTTTGCAACTTGGTGTCATTACAGTTTAAGGGCTGCAAATATTGCTATAAATTGCCTCCACTTGGACAGCTTCCAATGTTGAAAGAGCTTCAGATTATTAAATTTGAAGGATTAGTGAATGTGGGGTCTGAGTTTTATGGAAATAGAACTTCTGTAGCTGATGAGAGGTACTTTCCTGCACTGGAAATTCTAAGGATTGAGTGTATGTCATCATGGGAGAAATGGTGTTCTGATGCTGAAAATGTAGGCAGTAGAGCTTTCTGTCATCTTAGAGAGCTTTATATTGAAAGCTGTCCCAAGCTGACAGGGGATTTACCATGTAACCTTCCATCCTTGACATTACTTGTAATCAGAGATTGCAAACGTTTGCTTTGTTCACTTCCCAAAGCTCCACTTCTGCGTGTGCTCAACATTCAGAATTGTGAGAAGCTAGAATTCCCATTACATGCACCATGGTACCACCAATCACTGACATCTTTGTACTTACATGATAGCTGTGACTCACTAATGTTCTTGCCATTAGATCTCTTCCCCAATCTCAAGTCTCTAGATATTTGGGGATGTAAAAATCTTGAAGCACTTACTGTTTCAGAATCAGATTCAACTCCTCAAAATCTCAAATCCCTCCATTCACTGTGCATAAGGCATTGTCCAAATTTCATATCATTTCCCAAAGGAGGATTTGAAGCCCCAATGCTCACTTTATTAACCATTAACTATTGTGAGAAGTTGAATTATTTGCCTGAAAAAATGCATGACCTTATGCCAAGCTTGAAAGAACTTCAACTGAGGGGTTGTCCACAAATTGAGTCATCTACTATGAGGCCACTCAGGATTCGGATTTGCAACAAACTCATGGAAGGGAAACAAAACCACTCTGATCCTCTCTTTGCAAGGTTGAAGGGTCTGGCCTCTATTCATAGTCCTTCATCAAGTTAG 2115 0.3806 MQEWYKVLNSEIWDLQDHESNILPALRLSYHYLPSHLKRCFAYCAIFPKDYEFEKENLILLWMAEGLLQQSKRHRRIEEVGNEYFCELVSRSFFQQSRRGKSCFLMHHLINDLAQFVSGTFSVKMEGNSSNEIEERTRHLSHIIAHSSSYVNLKDVSKANHLRTFLQIRTIGTSIDLFNNMPNDLFTKLRYLRVLSLVGAYFYSLPDSIGELKHLRYLEVFDTEIIKLPESICSLYNLQTLKLVGCYKLIELPTDIHKLVNLRYLDIRGTCLKWMPLQISELKSLQKLSDFFVGEDYGSSIGELGELSNLHGALFIHYIENVVNHKDSEKAKLKEKNGLEKLSLDWGGNGDTENSQHEKAILDSLQPHTNLKELDIYEYPGTEFPNWLGDYSFCNLVSLQFKGCKYCYKLPPLGQLPMLKELQIIKFEGLVNVGSEFYGNRTSVADERYFPALEILRIECMSSWEKWCSDAENVGSRAFCHLRELYIESCPKLTGDLPCNLPSLTLLVIRDCKRLLCSLPKAPLLRVLNIQNCEKLEFPLHAPWYHQSLTSLYLHDSCDSLMFLPLDLFPNLKSLDIWGCKNLEALTVSESDSTPQNLKSLHSLCIRHCPNFISFPKGGFEAPMLTLLTINYCEKLNYLPEKMHDLMPSLKELQLRGCPQIESSTMRPLRIRICNKLMEGKQNHSDPLFARLKGLASIHSPSSS. 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04652 704 SUPERFAMILY RNI-like 450 664 - -
Seca7g04652 704 Gene3D Ribonuclease Inhibitor 145 516 IPR032675 -
Seca7g04652 704 PANTHER DISEASE RESISTANCE PROTEIN RP 2 574 IPR044974 GO:0006952
Seca7g04652 704 Gene3D Ribonuclease Inhibitor 517 679 IPR032675 -
Seca7g04652 704 SUPERFAMILY L domain-like 106 514 - -
Seca7g04652 704 Gene3D - 24 116 IPR036388 -
Seca7g04652 704 FunFam Probable disease resistance protein At1g63360 30 116 - -
Seca7g04652 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 44 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04652 Seca-Chr7 139334276 139336390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04652 192 288 WRKY Transcription Factor Family AT4G12020 34.694 9.62e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04652 - - vum:124831962 1165.6