Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04639 ATGAAAGAATCGGGTTCTTCCAGTAAGAAAAGAAAACATGACGAGTTGATGATGTATGATGACCCTTGGAAGATCAAGAAAGTCCTCAAAGAGAGTGATCTTGGCAACATGAGGAGACTCTTGCTCGGTAGAGATTTGGCACAAGAATTGGTGCTGCCTGTGTTGTGTGCTGATGCTGATCTTGACAATGGAACTCAAGTCATGATAAAGGATGTGGACACCAACTCCATGCATTCCCTGCTTTTCAAGAGATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGCAGCTGGGTCCAAGATTTTGTTATCAGAAGAGCCTTAAAGAAAGGAGATGAGATTGGCCTTCACTGGGATCCATACAACAATCACTTCAATTTCTCTGTTCTTAAGGCCATAGATTTGGCACAAGAATTGGTGCTGCCTGTGTTGGGTGCTGATGCTGATCTTGACAATGGAACTCAAGTCATGATAAAGGATGTGGACACCAACTCCATGCATTCCCTGCTTTTCAAGAGATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGCAGTTGGGTCCAAGATTTTGTTATCAGAAGAGCCTTAAAGAAAGGAGATGAGATTGGCCTTCACTGGGATCCATACAACCGTCGCTTCAATTTCTCTATTCTTCAGGCCATTTAG 663 0.4268 MKESGSSSKKRKHDELMMYDDPWKIKKVLKESDLGNMRRLLLGRDLAQELVLPVLCADADLDNGTQVMIKDVDTNSMHSLLFKRWVSSRSYVFIGSWVQDFVIRRALKKGDEIGLHWDPYNNHFNFSVLKAIDLAQELVLPVLGADADLDNGTQVMIKDVDTNSMHSLLFKRWVSSRSYVFIGSWVQDFVIRRALKKGDEIGLHWDPYNRRFNFSILQAI. 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04639 220 SUPERFAMILY DNA-binding pseudobarrel domain 21 127 IPR015300 -
Seca7g04639 220 CDD B3_DNA 23 130 IPR003340 GO:0003677
Seca7g04639 220 CDD B3_DNA 148 217 IPR003340 GO:0003677
Seca7g04639 220 Gene3D - 22 129 IPR015300 -
Seca7g04639 220 Gene3D - 130 216 IPR015300 -
Seca7g04639 220 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 136 218 - -
Seca7g04639 220 SUPERFAMILY DNA-binding pseudobarrel domain 148 214 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04639 Seca-Chr7 139155312 139162109 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04639 21 148 B3 DNA Binding Superfamily AT3G26790 27.273 3.18e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04639 - - aprc:113850604 176.792