Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04634 ATGCTTTGCGTCGACTGCTCCAACGTTTGCACACGTTTAAGGATGGGTACATGTCCTTGTAGTCATACCATAACCAAGACGCAAGACTTTGCTGCCAAAACCAAAGTTTGTGTCCATTTATCACTTGGTGTGTGTCTTTGTACCATGACAGAATCGGGTTCTTCCAGCAAGAAAAGGAAACATGATGATGAAGCACTCATTGGTTCAAGAAAGAAAGCATGCAGCAATGAAGTGGACAGAAGTTGGGGTTACTCAACAGAGTTGATGCTGTATGATGACCCTTGGAAGATCAAGAAAGTCCTCAAAGAGAGTGATCTTGGCAACATGAGCAGACTCTTGCTCCCTAGAGATTTGGCACAAGAATTGGTGCTGCCTGTGTTGGGTGCTGATGCTGATCTTGACAATGGAACTCAAGTCATGATAAAGGATGTGGACACCAACTCCATGCATTCCCTGCTTTTCAAGAGATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGCAGTTGGGTCCAAGATTTTGTTATCAGAAGAGCCTTAAAGAAAGGAGATGAGATTGGCCTTCACTGGGATCCATACAACCGTCGCTTCAATTTCTCTATTCTTCAGGCCATTTAG 615 0.4374 MLCVDCSNVCTRLRMGTCPCSHTITKTQDFAAKTKVCVHLSLGVCLCTMTESGSSSKKRKHDDEALIGSRKKACSNEVDRSWGYSTELMLYDDPWKIKKVLKESDLGNMSRLLLPRDLAQELVLPVLGADADLDNGTQVMIKDVDTNSMHSLLFKRWVSSRSYVFIGSWVQDFVIRRALKKGDEIGLHWDPYNRRFNFSILQAI. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04634 204 CDD B3_DNA 95 201 IPR003340 GO:0003677
Seca7g04634 204 Gene3D - 94 200 IPR015300 -
Seca7g04634 204 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 62 202 - -
Seca7g04634 204 SUPERFAMILY DNA-binding pseudobarrel domain 93 198 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04634 Seca-Chr7 139117440 139118054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04634 79 190 B3 DNA Binding Superfamily AT3G24650 31.250 1.41e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04634 - - aprc:113850604 226.868