Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04624 ATGGCTTCCCGTTATGATTTAATCTGTAATGTGAATGGAGGCTCTGAGCATAAGATATGGAGAATTAAAGTCAGAGTCATTAGGCTATGGAGGTCTTCATATTTTAAGGATAACAATAATAAACCAATGATTGAATTGGTTGTTTTGGACGAACAGGGAGGTCGTATCCAATGCACGGTGAAGAGCATTCATGTGTATCTGTTTGAGAATAGTATCAACGAAGGTAATGTGTACATGCTAGAAAACCTCAGCGTTGCACTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATATTCTTCAAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAATATTGAATGAAACTAAGGACGACAGGCGTTTGGTTGGTAAGTTTTATTTACACTATGTTTAA 450 0.3711 MASRYDLICNVNGGSEHKIWRIKVRVIRLWRSSYFKDNNNKPMIELVVLDEQGGRIQCTVKSIHVYLFENSINEGNVYMLENLSVALNSGKYKPTMHEFRIFFKRETRVTLVEDSSIPLYGFSFVPFVEILNETKDDRRLVGKFYLHYV. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04624 149 Gene3D - 8 115 IPR012340 -
Seca7g04624 149 SUPERFAMILY Nucleic acid-binding proteins 15 115 IPR012340 -
Seca7g04624 149 CDD RPA1_DBD_A_like 21 109 - -
Seca7g04624 149 Pfam Domain of unknown function DUF223 45 136 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04624 Seca-Chr7 138955049 138955586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04624 20 132 Core DNA Replication Machinery Family AT2G06510 30.508 8.61e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04624 - - adu:110274503 172.94