Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04607 ATGATGGAAGACAAGGGTAATAGGGTTAATGAGGGTGAAGGTGAAGATGTAAATAATTTGAAATCCCCTGATGAAGAAAATGCTTGTTCTGGTGAGGTTGTTCCTGATGTGTTCAAAAGTATTTCTGAGTTAACTGATGACGACATTAGAATGCTTGAGTTTGATTCTGAACTGGATGCATATAATTTTTATTGGGAAAAGAGTGAGAAGCATTTAAATAGGACAAATAGAATTAGGGAAGATAAGGCCATTACTCGTACCAATTGTCTTGCAAGGCTTCGATTGTATTTAGATAATAATAATAATAGTGGGAAGTGGAGGGTTGGAATGTTTGAGCCACAACACAATCATGAGCTAACTCCTGCAAATATGGTACATTTGATGCCTGCTTATCGTGGTCTGAGTGCTGCTGATAAGGCACAAGTAAATAGTCTTCACTTATATGGTGTTAGGACTTGTCATATAATGAGGCTAATAATGGGTCAGAAAGGTGGTCACTCAGATTTGGGATTTTGTAAGAAGGACTTGTACAATCATATTGACAAGGAAAATAGGGCCAAAATAGAGGATGGAGATGCTTTTGCTGCTTTGTGCTATCTTCAAGCTAAGTATGATAGTAATCCCATGACATTTGTTATGTTCACTACTACTGAAGATGATAGGCTTGAAAACTTGTTCTGGGCTGATGTAGGAAGCAGAATTGATTATGCTTGTTTTGGTGATATAGTTTCCTTTGACACCACATATAAAAAAACAAGTATAATAGGCCTTTAG 774 0.3682 MMEDKGNRVNEGEGEDVNNLKSPDEENACSGEVVPDVFKSISELTDDDIRMLEFDSELDAYNFYWEKSEKHLNRTNRIREDKAITRTNCLARLRLYLDNNNNSGKWRVGMFEPQHNHELTPANMVHLMPAYRGLSAADKAQVNSLHLYGVRTCHIMRLIMGQKGGHSDLGFCKKDLYNHIDKENRAKIEDGDAFAALCYLQAKYDSNPMTFVMFTTTEDDRLENLFWADVGSRIDYACFGDIVSFDTTYKKTSIIGL. 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04607 257 PANTHER OS01G0519700 PROTEIN 68 246 - -
Seca7g04607 257 MobiDBLite consensus disorder prediction 1 31 - -
Seca7g04607 257 Pfam FAR1 DNA-binding domain 71 120 IPR004330 -
Seca7g04607 257 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04607 Seca-Chr7 138170116 138170990 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g04607 FAR1 6e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04607 - - ccaj:109792835 229.95