Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04573 ATGGCAGCTCCGTTATCAAATTTTGCATGTTATAATGCAACATTGAGTTCTTCCAACAAAATCTGGATGGGTGATGATGTTCTTGCAAAACGTGTTCCACTTTTGTCTCTCCAAATTGCCTACAATATTGTGGCTTCTCGTTTTATATACCACATCCTCAGACCCCTCCATGTGCCTGCTATTATTGCACAAATTCTTGCTGGTTTTTTTATGGGTTCATCTGGGTTGGGAAGATATGAAAGTGTATTTAACATAATGTACCGTCAGGAAGGAATCCTAGCAGTTGAAACCTTTGCAAATTTGGGAATTATATATTATGTGTTCCTGAGTGGTTTAGAGATGAATTCAGAGACAGTGCTACGTTCAACAAAGAAGTCTACAAGCATTGCTATTGCTGGAATTGTGATTCCAATGTTGTTGGGTGTTGGTTTTCTTACTCTACAACACAAAATTCAATATGTCCCACGAGGGCTACAAGAATTATACAAACTTGAATCTGCTAAAGGGTATTTGTTCTGGTGTTTAACTCTTTCTGTCACAAGTTTCCCAGTTATTGCTAGAATCCTTGCTGAGCTCAAACTCCTATATACAAGGCTTGGCAAAGATGCCTTAATAGCAGCCATGTTGATTGATGCATATGGTTGGGTTTTATTCACAATGTTGGTTCCTTATGCTAATAGTGGTGGAAAACCATTACTTTCAGTAATGAGTACATTGTTGTTCATCATTTTTTGCTTTTGTGTGTTGCGTCCTATCCTTACTCCAATCATTGAACTCAAAACCAGCAAGGATAATTGGAATAAGTCCCAAGTGTTGGATGTGTTGATGGGCCTTTTTGTTTGTTCATATATTACAGATTTTTTTGGCACACATCCCATTGTTGGGGCTTTTGTGTATGGACTAATTTTACCTAATGGGAAGTTTGCTGATGTGGTGATGGAAATGTCAGATGATTTTGTTACTGGGGTTGTGTGCCCTATCTATTTTGCTGGTTTTGGTATGAGATTCAATGTGGGCTTGATTACAGAACAACCAAATTCACATTTGATGATGCTCATTGTTCTACTGTTATCCATCCCAAAAGTTTTGAGCTCTTTAATAGTCACTTTCTTCTTTGGTATGCCTGCTAGAGATGGTGTGGCCATTGGATTGCTTCTAAACACCAAAGGCATCATGGCTGTGATACTACTCACCATTGCTTGGGACAAAAGAATGTTGGATCCACTTTCATTCACAGTTATGATGACTGCTTTTCTATTTATGACTGTGATGGTATCTCCTTTGATCAATGCTATATACAAGCCAAAATTTCGATTTATGCAGTCTCAACTAAGGACTGTGCAGAAGCTAAGGTTTGATGCAGAGCTTAGGATTGTGTCTTGTGTCCACAATACTCACCAAGCCACTAGCATAGCCCGGGTCCTTCAAGCCATGAATGCCACTAGAATTTCACCTTTACATGTCTCTATACTTCACCTTGTTGAACTTACAAGACATGGCACTGCCCTTCTTGTTTCCCAAATAGACAACTCATCATCTGGCAGTGTGAAAGCAGAACACATGTATGGATCACAAGCAGAACTTGAGAACATAACCAATGTGTTTGTAGAACTTGCACAGGAATACAATGCTGTTAGATTTGACACATCTAGTGCTGTGTCATCTTATGCAACTATCCATGAGGACATATACAATGTAGCAGAAGAGAAACGTGCAAGCCTAATTCTTCTTCACTTTCACAAAGAGTTAACTTCAGAAGGTGCTCTAGAAATAACCAACAATGCACATATTGATATAAATAGACATGTTCTCCAAAAAGCACCTTGTTCAGTTGGGATCTTTGTGGACCGTGGTGTTGGGTCATTGTTAGAAACAAAAATGAACATTATTATGATCTTCATTGGAGGGCCTGATGATCGTGAAGCCTTGTCTATTGCATGGAGAATGGCAGGGCATTCAGGAACAAAATTGCATGTTGTGAGGATTCATTTGTTAGGTGAAGTTGTGGAAGAAAATGAAGATGAAATAGAAGACAATTATGGTAGTGGGAATATGCTTTGTACAGTAATGGACAATGTGATGGAGAAAGAGTTGGATGAAGAGTACATATTTTCCTTTAGGCACAAGGCAGTGAACAATAATGATTCAATTGTTTACTCAGAGAAAGAAGTGAGAACAAATACAGGTGAGGACATTCCTTTACTTCTCAATGAAATAGATAAACCTGGCTATGACTTATACATTGTTGGTCAAGGGAGTGGTAGCAAGTCCCCAATTTTTTCAAGATTGTTAGAATGGTGTGAAAACCCTGAACTTGGGGTTATAGGGGACATAGTAGCTTCAACTAGTTTTGGCACACACTCTTCATTGCTTGTTGTGCAGCAATATATGCCTGGGAGAAAGCTTAAGTTCAAACGTCCAAAACAAAGTTCCCATAAGAAAGGTGATCATGAGATGTTGTAA 2463 0.3873 MAAPLSNFACYNATLSSSNKIWMGDDVLAKRVPLLSLQIAYNIVASRFIYHILRPLHVPAIIAQILAGFFMGSSGLGRYESVFNIMYRQEGILAVETFANLGIIYYVFLSGLEMNSETVLRSTKKSTSIAIAGIVIPMLLGVGFLTLQHKIQYVPRGLQELYKLESAKGYLFWCLTLSVTSFPVIARILAELKLLYTRLGKDALIAAMLIDAYGWVLFTMLVPYANSGGKPLLSVMSTLLFIIFCFCVLRPILTPIIELKTSKDNWNKSQVLDVLMGLFVCSYITDFFGTHPIVGAFVYGLILPNGKFADVVMEMSDDFVTGVVCPIYFAGFGMRFNVGLITEQPNSHLMMLIVLLLSIPKVLSSLIVTFFFGMPARDGVAIGLLLNTKGIMAVILLTIAWDKRMLDPLSFTVMMTAFLFMTVMVSPLINAIYKPKFRFMQSQLRTVQKLRFDAELRIVSCVHNTHQATSIARVLQAMNATRISPLHVSILHLVELTRHGTALLVSQIDNSSSGSVKAEHMYGSQAELENITNVFVELAQEYNAVRFDTSSAVSSYATIHEDIYNVAEEKRASLILLHFHKELTSEGALEITNNAHIDINRHVLQKAPCSVGIFVDRGVGSLLETKMNIIMIFIGGPDDREALSIAWRMAGHSGTKLHVVRIHLLGEVVEENEDEIEDNYGSGNMLCTVMDNVMEKELDEEYIFSFRHKAVNNNDSIVYSEKEVRTNTGEDIPLLLNEIDKPGYDLYIVGQGSGSKSPIFSRLLEWCENPELGVIGDIVASTSFGTHSSLLVVQQYMPGRKLKFKRPKQSSHKKGDHEML. 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04573 820 Pfam Sodium/hydrogen exchanger family 44 428 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca7g04573 820 Gene3D - 34 439 IPR038770 -
Seca7g04573 820 PANTHER CATION/H + ANTIPORTER 9 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04573 Seca-Chr7 137631361 137634696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04573 10 797 Antiporter Super Family AT2G13620 36.875 3.29e-174 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04573 - K26731 gmx:100792990 1004.2