Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04561 ATGTCGCTGCCGGAATGTTCCGCGTCGCAACTGGCGCAGTTAATCGGCCCCAACGCGACAAACGCCGCCGCCGCCGCCAATTTCATCTGTGAACAGTTCGCCGCTGTAGGGAACAAGTTCACCGACACAGCATTTGCGGTGGACAACACGTACCTTCTCTTCTCAGCTTATCTAGTTTTCTCTATGCAGCTCGGTTTCGCCATGCTCTGTGCCGGTTCAGTTCGCGCAAAGAACACCATGAACATCATGCTCACCAACGTCCTTGACGCCGCCGCCGGTGGCCTCTTCTACTACCTCTTCGGCTTCGCCTTTGCCTTCGGTGCACCTTCCAACGGCTTCATCGGTAAGCACTTCTTCGGCCTCAAAGACGTTCCTACAGACAGCTTTGACTACAGTAACTTCCTTTACCAGTGGGCTTTTGCCATCGCCGCCGCCGGCATCACCAGCGGATCCATCGCCGAACGGACACAGTTCGTGGCTTACCTTATTTACTCTTCCTTCCTCACCGGCTTTGTCTACCCTGTGGTTTCTCACTGGTTCTGGTCAGGTGATGGCTGGGCCAGTGCCTTTAACACCGGGGACCTGTTATTTGGCACCGGAGTGATCGACTTTGCCGGCTCCGGCGTCGTCCATATGGTCGGCGGAATCGCTGGTCTCTGGGGTGCCCTAATTGAAGGTCCTAGAATAGGACGTTTTGACCATACCGGTCGAGCCATCGCGCTTCGTGGACACAGCGCTTCCCTTGTTGTTCTTGGAACCTTCATGCTTTGGTTCGGTTGGTACGGTTTTAACCCTGGCTCCTTTAACAAGATTCTCAACGCTTATAATTCAGGTAACTATTATGGCCAGTGGAGTGCGGTGGGAAGGACCGCCGTGACGACCACGTTGGCTGGTTGCACGGCGGCGCTGACTACTCTTTTTGGAAAAAGAATTCTCTCCGGTCACTGGAACGTTACCGATGTGTGTAACGGTTTGTTGGGCGGGTTTGCTGCTATTACTGCTGGGTGCTCCGTTGTGGAGCCGTGGGCTGCCATCGTGTGTGGTTTCGTGGCTGCGGTGGTTTTGATCGCGTGTAACAGACTCGCGGAGAAGGTGCGTTTTGATGATCCGTTGGAAGCCGCGCAGCTTCACGGAGGTTGTGGCGCGTGGGGGGTTATATTCACCGCGTTGTTCGCTAAGGAGGAGTATGTGAACCAGGTTTACCCAGGTAAACCGGGTCGACCTTACGGGTTGTTCATGGGTGGTGGAGGGAAGCTGTTGGGGGCGCACGTGATTCAGGTTTTGGTTATTACCGGTTGGGTCAGTGCCACCATGGGTCCTCTTTTCTATTTTCTGAATAAGATGAATTTGCTTCGGATCTCCGCGGAGGATGAACTTGCGGGTATGGATATGACCCGACATGGTGGTTTTGCTTATGCCTATGAGGATGAGTCGCACAAGCATGGGATTCAGTTGAGGAAGATTGAGCCTAACGCTTCCACGCCCACTACCACAGATTCATGA 1503 0.5409 MSLPECSASQLAQLIGPNATNAAAAANFICEQFAAVGNKFTDTAFAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGAPSNGFIGKHFFGLKDVPTDSFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSGDGWASAFNTGDLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHTGRAIALRGHSASLVVLGTFMLWFGWYGFNPGSFNKILNAYNSGNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNRLAEKVRFDDPLEAAQLHGGCGAWGVIFTALFAKEEYVNQVYPGKPGRPYGLFMGGGGKLLGAHVIQVLVITGWVSATMGPLFYFLNKMNLLRISAEDELAGMDMTRHGGFAYAYEDESHKHGIQLRKIEPNASTPTTTDS. 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04561 500 PANTHER AMMONIUM TRANSPORTER 21 475 - -
Seca7g04561 500 Pfam Ammonium Transporter Family 51 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Seca7g04561 500 Gene3D Ammonium transporter AmtB like domains 27 492 IPR029020 -
Seca7g04561 500 FunFam Ammonium transporter 29 487 - -
Seca7g04561 500 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Seca7g04561 500 NCBIfam ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Seca7g04561 500 SUPERFAMILY Ammonium transporter 47 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04561 Seca-Chr7 137280891 137283288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04561 5 500 Inorganic Solute Cotransporters AT4G13510 83.166 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04561 K03320 - jre:109010430 835.099