Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g04544 ATGTTGCAGGATGTTATTCACCCACCACCACCACCGGCTGAGCAACTACCCATTGATGAAATCTCAAGCCCACTTAGTGCAAGAATTTTTGAACTCTGTGACCCTGAATTGTTCCCAGAGTCTCTACAGAATTCTGAGGTTACCTCCAGCTCAAATTGTTGCCATGAAGACAACTCTTCATATGCAACAAATATATCTCCAACTTTAGATGTAGATAATAAGATCAATAGCAATAGCAATATAGTTAACACCCCATCTAGTACCACTACAACCAGCACCACCACTAACAACAACAATAACAACACCACAACAAACAGCAGTAACCTGTCTATTATCTTTGACTCTCAAGAAGAAATTGACAATGACATATCTGCCTCCATAGACTTCTCATCCTCTCCATCTTTTATTGTTCCTCCACTTCTCCCAATCACAACTCAGCAGGAACAATTTGATTTCTCTTCAGCACAGCCCCATGTCCAACTAGAGGCAGGTTCAGTTTTGAAGGGCCTCCCTCAGTATTCCACTGACCCTGTTGTTGCACCTCTTATTGGGGCTCCATTACCATCTTTTTTTGAAGATGATTGTATATCTTCCATCCCTTCTTATGTGTCTCTTAACCCTTCATCTCCTTCTTGCTCTTATCTCAGTCCTGTCACTCCTGGCATAGGAGTATACATGCCTCCTGGCCCCCTTTGCACTGCCTTATCTGCTGACAGTTCTGGATTATTTAGTGGAAACATTCTTCTAGGTTCTGAACTGCAGACACAAGAATTTGACTACCAGGGAGAAAATGGTGGAACATATTGTACAGATTCAATTCAGAGGATGTTTAACCCACCAGACCTTCAGTTTCTCTACCAGGCACTTGGTACTGAGAGCCAGAAACTGGTAGCTGGGAGTGGGAGTTCTGCCACTTTGGCACCAGAAATCTCACACTTGGAGGACTCTGCCTTAAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATTCACAGATACATGAAGAAGAGAAATGAAAGGAATTTCAGCAAGAAAATAAAGTATGCTTGCCGCAAAACTTTGGCAGATAGCCGGCCCCGGGTTAGAGGAAGGTTTGCAAAGAATGATGACTTAGGAGAGACTCATAGACCAGCTTGTAGCAACCATGAAGAAGATGATGAGGAAATAGTTGTGAAAGAAGATGATGATATGGTTGGTTCCTCAGATATCTTTGCTCATATCAGTGGGGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTTGATTTGA 1278 0.4249 MLQDVIHPPPPPAEQLPIDEISSPLSARIFELCDPELFPESLQNSEVTSSSNCCHEDNSSYATNISPTLDVDNKINSNSNIVNTPSSTTTTSTTTNNNNNNTTTNSSNLSIIFDSQEEIDNDISASIDFSSSPSFIVPPLLPITTQQEQFDFSSAQPHVQLEAGSVLKGLPQYSTDPVVAPLIGAPLPSFFEDDCISSIPSYVSLNPSSPSCSYLSPVTPGIGVYMPPGPLCTALSADSSGLFSGNILLGSELQTQEFDYQGENGGTYCTDSIQRMFNPPDLQFLYQALGTESQKLVAGSGSSATLAPEISHLEDSALKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDLGETHRPACSNHEEDDEEIVVKEDDDMVGSSDIFAHISGVNSFKCNYSIQSLI. 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g04544 425 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 110 386 IPR045281 GO:0009909
Seca7g04544 425 Pfam CCT motif 328 370 IPR010402 GO:0005515
Seca7g04544 425 ProSiteProfiles CCT domain profile. 328 370 IPR010402 GO:0005515
Seca7g04544 425 MobiDBLite consensus disorder prediction 77 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g04544 Seca-Chr7 137007704 137012443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g04544 328 386 C2C2-CO-like Transcription Factor Family AT5G57660 45.312 3.08e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca7g04544 CCT 5.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g04544 - - gmx:100793417 601.668